Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6006 |
Symbol | hemC |
ID | 5358858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6203610 |
End bp | 6204551 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640815050 |
Product | porphobilinogen deaminase |
Protein accession | YP_001351322 |
Protein GI | 152983553 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.254392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCC GCGAAATCCG CATCGCCACC CGCCAGAGCG CCCTCGCCTT GTGGCAGGCC GAATACGTCA AGGCGCGCCT GGAACAGGCC CATCCCGACC TGACCGTCAC CCTGCTGCCG ATGACCAGTC GCGGCGACAA GCTGCTCGAC GCGCCGCTGG CGAAGATCGG CGGCAAGGGC CTGTTCGTCA AGGAGCTGGA GACCGCCCTG CTCGAGGGCG CCGCCGACAT CGCGGTGCAC TCGATGAAGG ACGTGCCGAT GGACTTCCCC GAAGGCCTTG GCCTCTACAC CATCTGCGAG CGCGAAGACC CGCGTGACGC CTTCGTCTCG AACACCTACG CGAGCCTCGA CCAACTGCCC GCCGGCAGCG TGGTCGGCAC CTCCAGCCTG CGCCGCCAGG CGCAACTGCT GGCGCGCCGG CCGGACCTGC AGATCCGCTT CCTGCGTGGC AACGTCAACA CCCGCCTGGC CAAGCTGGAT GCCGGCGAGT ACGACGCGAT CATCCTCGCC GCCGCCGGCC TGATCCGCCT CGGCTTCGAG TCGCGCATCC GTTCCTCGAT CAGCGTCGAC GACAGCCTGC CCGCCGGTGG CCAGGGCGCG GTCGGCATCG AGTGCCGCAC CGCCGACGCC GACCTGCACG CCCTGCTGGC GCCCCTGCAC CACGCCGATA CGGCGCTGCG GGTCACTGCC GAGCGCGCGC TGAACAAGCG CCTCAACGGT GGCTGCCAGG TGCCGATCGC CTGCTACGCG ATTCGCGAGG GTGACCAACT GTGGCTGCGC GGCCTGGTCG GCCAGCCTGA CGGCAGCCAG TTGCTGCGGG CCGAAGGGCG GGCGCCCCTG GCGCAGGCCG AGGCGCTGGG CGTACAGGTG GCCGACGACC TCCTGGCGCA GGGCGCCGAG GCGATCCTCG CAGCGGTCTA TGGCGAGGCT GGGCATCCGT GA
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Protein sequence | MSSREIRIAT RQSALALWQA EYVKARLEQA HPDLTVTLLP MTSRGDKLLD APLAKIGGKG LFVKELETAL LEGAADIAVH SMKDVPMDFP EGLGLYTICE REDPRDAFVS NTYASLDQLP AGSVVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE SRIRSSISVD DSLPAGGQGA VGIECRTADA DLHALLAPLH HADTALRVTA ERALNKRLNG GCQVPIACYA IREGDQLWLR GLVGQPDGSQ LLRAEGRAPL AQAEALGVQV ADDLLAQGAE AILAAVYGEA GHP
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