Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5997 |
Symbol | |
ID | 5359457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6194696 |
End bp | 6196612 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640815041 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001351313 |
Protein GI | 152983782 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.148625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGAC TCCTCAATCT TACGCTACAG CGCGGGCCGC AACGCCTCCT GGAAGCTGCC GAACTGACCC TGCATGCCGG CCAGAAGGCC GGCCTGATCG GGGCCAATGG CGCTGGCAAG TCCAGCCTGT TCGCCCTGCT GCGTGGCCAG CTCGGCCAGG ACGCCGGCGA TTGCCAGCTG CCTGCCGACT GGCGCATCGC GCACATGCGC CAGGAGGTCG ATACCCTCGA GCGCCTGGCC GTGGACTATG TGCTCGACGG TGACCTCCGC CTGCGCGAAA TCCAGACGGC CCTGGTCGCC GCAGAAGCGG CGCACGACGG CACCGCCCAG GCACGCCTGC ACACCGAGCT GGACAACGTC GACGGCTATA CCGCCGATGC GCGGGCGCGA AAGCTGCTCG CCGGCCTGGG CTTCGGCAGC GAGCAGATGG AGCGCCGCGT CGGCGACTTC TCCGGTGGCT GGCGGATGCG CCTGAACCTG GCGCAGGCGC TGATGTGCCC GTCCGACCTG CTGTTGCTCG ACGAGCCGAC CAACCACCTC GACCTCGACG CGATCCTCTG GCTGGAGGAC TGGCTCAAGA GCTATCCGGG CACCCTTGTG CTGATTTCCC ACGACCGCGA CTTCCTCGAT GCGGTGGTGG ACCACGTGGT GCACCTCGAG AACCGCAAGC TGACTCTTTA TCGGGGCGGC TATTCCGCCT TCGAGCGGAC CCGTGCCGAG CGCCTGGCGC AACAGCAGCA GGCCTACGAG AAGCAGCAGG CGCAGCGCGC GCACATGGAA AGCTTCATCG CCCGCTTCAA GGCCAAGGCC ACCAAGGCGC GCCAGGCGCA GAGCCGGATC AAGGCGCTGG AGCGCCTCGA GGAACTGGCG CCGGCCCACG TCGATTCGCC GTTCAACTTC AGCTTCCGCG AGTCGGACAA GATTTCCCGG CCGCTGCTGG ATCTCGGCGA CGGCCGCCTC GGCTATGGCG ACAAGCCGGT GCTGGAGAAG GTCAAGTTGC AACTGGTGCC CGGCGCGCGC ATCGGTCTAC TCGGCCCCAA CGGCGCCGGC AAGTCGACCC TGATCAAGAC CCTGGCTGGC GACCTGCCCG AACTGGGTGG ATGCCTGCTG CGCGGCGAGA ACCTGGCGAT CGGCTACTTC GCCCAGCACC AGCTCGACTC GCTCGATCCG CAGGCCAGCC CGCTGCTGCA TCTGCAGCGT ATCGCCCCCG GCGAGCGCGA GCAGACCCTC AAGGACTTCC TTGGCGGCTT CGACTTCCGC GGCGCGCGGG TAGACGAGCC GGTGCTGAAC TTTTCCGGTG GCGAGAAGGC CCGCCTGGCG CTGGCGCTGA TCGCCTGGCA GAAGCCCAAC CTGCTGCTGC TCGACGAGCC GACCAACCAC CTCGACCTGG AGATGCGCCT GGCCCTGACC ATGGCCCTGC AGGAATTTTC CGGGGCGGTG CTGGTGGTTT CCCACGATCG CCACCTGCTC AAGAGCACCA CCGACGAGTT CCTCCTGGTC GCCGACGGCC GCGTGGTGCC GTTCGACGGC GACCTCGACG ACTACGCCCG CTGGCTGGTC GACTATCGCG CGCGCAAGGC GCCGCAGGCC GAAGCGCTGG CGAGCGTGCC GGCCGAACGC ACCGACAGGC GCGCCCAGCG CCAGGCCGCC GCCGCGCTGC GCCAGCAACT GGCGCCGCAC AAGCGCGAGG CCGACAGGCT GGAGCGCGAA CTCGGCGCGC TGCACGAGAA ACTCGCCGCC CTCGAGGCGC GGCTGGGCGA CAGCGCATTG TATGAAGCGG CGAGAAAGGA CGAATTGCGT GACCTGTTGT CTGAGCAGTC AGGCCTGAAG GCTCGAGAAG GCGAGCTGGA GGAACGTTGG CTGGAGGCGC TGGAAACCCT CGAAGCCTTG CAGAAAGAAC TGGAGGCCAG TGAGTGA
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Protein sequence | MIRLLNLTLQ RGPQRLLEAA ELTLHAGQKA GLIGANGAGK SSLFALLRGQ LGQDAGDCQL PADWRIAHMR QEVDTLERLA VDYVLDGDLR LREIQTALVA AEAAHDGTAQ ARLHTELDNV DGYTADARAR KLLAGLGFGS EQMERRVGDF SGGWRMRLNL AQALMCPSDL LLLDEPTNHL DLDAILWLED WLKSYPGTLV LISHDRDFLD AVVDHVVHLE NRKLTLYRGG YSAFERTRAE RLAQQQQAYE KQQAQRAHME SFIARFKAKA TKARQAQSRI KALERLEELA PAHVDSPFNF SFRESDKISR PLLDLGDGRL GYGDKPVLEK VKLQLVPGAR IGLLGPNGAG KSTLIKTLAG DLPELGGCLL RGENLAIGYF AQHQLDSLDP QASPLLHLQR IAPGEREQTL KDFLGGFDFR GARVDEPVLN FSGGEKARLA LALIAWQKPN LLLLDEPTNH LDLEMRLALT MALQEFSGAV LVVSHDRHLL KSTTDEFLLV ADGRVVPFDG DLDDYARWLV DYRARKAPQA EALASVPAER TDRRAQRQAA AALRQQLAPH KREADRLERE LGALHEKLAA LEARLGDSAL YEAARKDELR DLLSEQSGLK AREGELEERW LEALETLEAL QKELEASE
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