Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5978 |
Symbol | glpT |
ID | 5358143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6175018 |
End bp | 6176364 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640815022 |
Product | sn-glycerol-3-phosphate transporter |
Protein accession | YP_001351294 |
Protein GI | 152988771 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.207284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGAA TCTTTCGTCC CGCGCCACAC CAGGCGCCCC TGCCCGATGC CGAGGTGGAC AGCACCTACC GGCGTCTGCG CTGGCAGATC TTCGCCGGCA TCTTCATCGG CTACGCGGGT TACTACCTGC TGCGCAAGAA CTTCTCCCTG GCCATGCCCT ACCTCATCGA GGATGGCTAC AGCCGTGGCC AGCTGGGCGT CGCGATGTCG GCCATCGCCA TCGCCTACGG CCTGTCGAAA TTCATCATGG GGCTGGTCTC GGACCGCTCC AACCCGCGGG TCTTCCTGCC GTTCGGGCTG CTGGTGTCGG CGGCGGTGAT GTTCATTTTC GGATTCGCGC ACTGGGCTAC CTCCAGCGTC GCGATCATGT TCGTCCTGCT CTTCATCAAC GGCTGGGCAC AGGGCATGGG CTGGCCGCCG AGCGGACGGA CCATGGTCCA CTGGTGGTCG CAGAAGGAGC GCGGCGGCGT GGTCTCGGTG TGGAACGTCG CCCACAACGT CGGCGGCAGA CTGATCGGTC CGCTGTTCCT GCTCGGCCTG GCGCTGTTCG GCGACTGGCG CTCGGCCTTC TACGTGCCGG CGATCGTCGC CGTGGGCGTA GCCGTGTTCG CCTATTTCGC CATGCGCGAC ACCCCGCAAT CCTGTGGCCT GCCGCCAATC GAGAGGCACA AGGACGACTA CCCCGAAGGC TACGACGAAC ACCACGAGCG CGAGCTGTCG ACCAAGGAGA TCTTCGTTAC CTACGTGCTG CGCAACAAGC TGCTCTGGTA CATCGCCCTG GCCAACGTTT TCGTCTACCT GCTGCGCTAC GGCGTGCTCG ACTGGGCCCC GACCTACCTG AAGGAAGCCA AGCACTTCAA CGTCGACAAG TCGTCCTGGG CATACTTCTT CTACGAATGG GCGGGGATTC CCGGCACCCT GCTCTGCGGC TGGCTGTCGG ACAAGCTGTT CAAGGGCAAT CGCGGCGCCA CCGGCGTGGT GTTCATGATC CTGGTGACCA TCGGCACCCT GATCTACTGG CTGAACCCGG CCGGCAACCC GGCCATCGAC ATGGCCGCGC TGATCATGAT CGGTTTCCTG ATCTACGGTC CGGTGATGCT GATCGGCCTG CAGGCCCTGG AACTGGCGCC GAAGAAGGCG GCGGGCACCG CGGCCGGCTT CACCGGACTG TTCGGCTATC TCGGCGGCTC GGTGGCGGCC AACGCCCTGG TCGGCTACAC GGTGGACCAC TTCGGCTGGG ACGGCGGTTT CAAGCTGCTG ATCGGTGCCT GCCTGCTGGC TATCCTGTTC CTCTGCCTTA CCCTGCGCAA ACCGGCGGTC CAGGCCTTGC CGCAACAGGA CGGCTGA
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Protein sequence | MFGIFRPAPH QAPLPDAEVD STYRRLRWQI FAGIFIGYAG YYLLRKNFSL AMPYLIEDGY SRGQLGVAMS AIAIAYGLSK FIMGLVSDRS NPRVFLPFGL LVSAAVMFIF GFAHWATSSV AIMFVLLFIN GWAQGMGWPP SGRTMVHWWS QKERGGVVSV WNVAHNVGGR LIGPLFLLGL ALFGDWRSAF YVPAIVAVGV AVFAYFAMRD TPQSCGLPPI ERHKDDYPEG YDEHHERELS TKEIFVTYVL RNKLLWYIAL ANVFVYLLRY GVLDWAPTYL KEAKHFNVDK SSWAYFFYEW AGIPGTLLCG WLSDKLFKGN RGATGVVFMI LVTIGTLIYW LNPAGNPAID MAALIMIGFL IYGPVMLIGL QALELAPKKA AGTAAGFTGL FGYLGGSVAA NALVGYTVDH FGWDGGFKLL IGACLLAILF LCLTLRKPAV QALPQQDG
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