Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5920 |
Symbol | fdhD |
ID | 5354247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6114406 |
End bp | 6115245 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640814965 |
Product | formate dehydrogenase family accessory protein FdhD |
Protein accession | YP_001351237 |
Protein GI | 152988296 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGCC AGCCTGCCTG CCCGGTATCC GCGGATACCT GGGCGCCTTC CGCCGTTCCC GACGATTACC GCTACGCCGA CCTGCACCTG CCGCAGCGGG TCGGCCAGGC CTCCCTTGCC GCCGAATGTG CCTTGGCGAT CAGCTACAAC GGCCTGAACC AGGCGGTGAT GATGGCCTCG CCCGAGGATA TCGAGGATTT CGTCCGCGGT TTCAGCCTCA GCAGCGGCTT CGTGGAGTCC ATCGACGACA TCTATGAAAT CCGCGTCAGC GGCCAGGGCG ACTCCCTCCA AGCCGAGGTC GAGATCAGCA GCCGCGCGTT CTGGCATCTC AAGCGCCAAC GCCGCCAGCT GGCCGGAACC TCCGGCTGCG GCCTGTGCGG CGTGGAAGCC CTGGAACAGG CCTTGCCGCA GCTGCCGGCG CGGACGCCGC GGGCGCTACC GCCGGCAGCC CACCTCGCCG GGCTGCGCCA GCGCATCGAA CAGGCCCAGC GACTGGCGCG CAACAGCGGC GCGCTGCACG CCGCGCTGTA CTTCGACGGC CATGGCGACC TGCGCCTGTG CCGCGAGGAC ATCGGCCGGC ACAACGCACT CGACAAGCTG ATCGGCGCCC TGCACCACCA GGGCCTGGAC GCCGCCAGCG GCTTCGCGGT GGTCACCAGC CGCTGCAGCC TGGAACTCAT CCACAAGGCC GTGCGTGCCG GGATCGGCAC GCTGGTCAGT CTCTCGGCGC CCACCGGCCT TACCGTGCAA TGGGCGCGGC GCCATCACCT GAACCTGGTC CACCAGCCCC ACCATAGCGC CCCGCGGGTC TACAGCCCGG CGCCGGCCGT CACCGAGTGA
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Protein sequence | MPCQPACPVS ADTWAPSAVP DDYRYADLHL PQRVGQASLA AECALAISYN GLNQAVMMAS PEDIEDFVRG FSLSSGFVES IDDIYEIRVS GQGDSLQAEV EISSRAFWHL KRQRRQLAGT SGCGLCGVEA LEQALPQLPA RTPRALPPAA HLAGLRQRIE QAQRLARNSG ALHAALYFDG HGDLRLCRED IGRHNALDKL IGALHHQGLD AASGFAVVTS RCSLELIHKA VRAGIGTLVS LSAPTGLTVQ WARRHHLNLV HQPHHSAPRV YSPAPAVTE
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