| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5910 |
|---|
| Symbol | arcD |
|---|
| ID | 5356737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 6103342 |
|---|
| End bp | 6104790 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640814955 |
|---|
| Product | arginine/ornithine antiporter |
|---|
| Protein accession | YP_001351227 |
|---|
| Protein GI | 152989491 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0569669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAG AAGCCAGCCA AAAACTCCGA CTAGGAGCGC TAACGGCTCT GGTTGTCGGA
TCGATGATCG GAGGAGGCAT CTTCTCCCTC CCGCAGAACA TGGCGGCCAG CGCCGACGTC
GGCGCCGTGC TGATCGGATG GGCGATCACC GCCGTCGGCA TGCTCACCCT CGCTTTCGTC
TTCCAGACCC TCGCCAACCG CAAGCCCGAA CTCGATGGCG GGGTCTACGC CTACGCCAAG
GCCGGCTTCG GCGACTACAT GGGTTTCTCC TCGGCCTGGG GCTACTGGAT CAGTGCCTGG
CTGGGCAACG TCGGCTACTT CGTCCTGCTG TTCAGCACCC TCGGCTACTT CTTCCCGATC
TTTGGCAAGG GTGACACCGT CGCCGCCATC GTCTGCGCCT CGGTGCTGCT CTGGGCCCTG
CACTTCCTGG TGCTGCGCGG GATCAAGGAG GCGGCGTTCA TCAACACCGT CACCACCGTG
GCCAAAGTCG TGCCGCTGTT CCTGTTCATC CTGATCTGCC TGTTCGCCTT CAAGCTGGAC
ATCTTCACCG CCGACATCTG GGGCAAGAGC AACCCGGACC TGGGCAGCGT GATGAACCAG
GTACGCAACA TGATGCTGGT CACCGTCTGG GTGTTCATCG GCATCGAGGG CGCGAGCATC
TTCTCCTCCC GCGCGGAAAA ACGCTCCGAC GTCGGCAAGG CCACCGTGAT CGGCTTCATC
ACCGTCCTGC TCCTGCTGGT GCTGGTGAAC GTGCTGTCGA TGGGTGTGAT GACCCAGCCG
GAACTGGCCA AGCTGCAGAA CCCGTCGATG GCGCTGGTGC TGGAGCATAT CGTCGGCCAC
TGGGGCGCAG TGCTGATCAG CGTCGGCCTG CTGGTCTCCC TGCTGGGCGC GCTGCTCTCC
TGGGTGCTGC TGTGCGCCGA GATCATGTTC GCCGCCGCCA AGGACCACAC CATGCCGGAG
TTCCTGCGCC GCGAGAACGC CAACCAGGTG CCGGCCAACG CCCTGTGGCT GACCAACATC
TGCGTACAGG TATTCCTGGT GGTGGTGTTC TTCACCTCGG GCGACCCGGA CGGCATGGAC
CCGTACACCA AGATGCTGCT CCTGGCCACC TCGATGATCC TGATCCCGTA CTTCTGGTCC
GCCGCCTATG GCCTGCTGCT GACACTGAAA GGCGAAACCT ACGAGAACGA CTCCCGCGAA
CGCGGCAAGG ACCTGGTCAT CGCCGGCATC GCCGTGGCCT ACGCGGTCTG GCTGCTCTAC
GCCGGGGGCC TGAAGTACCT GCTGCTGTCC GCCCTGCTGT ATGCGCCCGG CGCGATCCTC
TTCGCCAAGG CCAAGCACGA GGTCGGCCAG CCGATCTTCA CCGGTATCGA AAAACTGATC
TTCGCCGCAG TCGTCATTGG CGCCCTGGTG GCTGCCTACG GCCTCTACGA CGGTTTCCTC
ACCCTCTGA
|
|---|
| Protein sequence | MSQEASQKLR LGALTALVVG SMIGGGIFSL PQNMAASADV GAVLIGWAIT AVGMLTLAFV
FQTLANRKPE LDGGVYAYAK AGFGDYMGFS SAWGYWISAW LGNVGYFVLL FSTLGYFFPI
FGKGDTVAAI VCASVLLWAL HFLVLRGIKE AAFINTVTTV AKVVPLFLFI LICLFAFKLD
IFTADIWGKS NPDLGSVMNQ VRNMMLVTVW VFIGIEGASI FSSRAEKRSD VGKATVIGFI
TVLLLLVLVN VLSMGVMTQP ELAKLQNPSM ALVLEHIVGH WGAVLISVGL LVSLLGALLS
WVLLCAEIMF AAAKDHTMPE FLRRENANQV PANALWLTNI CVQVFLVVVF FTSGDPDGMD
PYTKMLLLAT SMILIPYFWS AAYGLLLTLK GETYENDSRE RGKDLVIAGI AVAYAVWLLY
AGGLKYLLLS ALLYAPGAIL FAKAKHEVGQ PIFTGIEKLI FAAVVIGALV AAYGLYDGFL
TL
|
|---|
| |