Gene PSPA7_5907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5907 
Symbol 
ID5356738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand+ 
Start bp6100644 
End bp6101276 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID640814952 
Productdicarboxylate transporter 
Protein accessionYP_001351224 
Protein GI152985011 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCGC TCGCGCGCGT CTGGGCGCGC CTGGAGGAAG GCCTGATCGC CTTCCTCCTC 
GCCGCCATGA CGCTGGTTAC CTTCGTTTAT GTAGTCCTCA ATAACCTCTA TACGCTGCTC 
TACGATCTCG CCGACCTCTG GGAGGGCGGC AACGAGACGC TGCTCGCCAT CGGCGATGGG 
GTCCTCACCC TGGCCCAAGA GATGACCTGG AGCAACGCCC TGACCAAGGC GCTGTTCGCC 
TGGCTGATCT TCCTCGGCAT CGCCTACGGC GTACGCACCG CCGGGCACCT CGGCGTGGAC 
GTACTGGTGA AGCTGGCTTC GCGACCGGTA CAGCGAGTGC TCGGCGTGAT CGCCTGCCTG 
GCCTGCCTCG GCTACGCCGG CCTGCTCTGC GTGGCCAGCT ACGACTGGGT GAAGACCCTG 
TTCATCGCCG GCATCGGCGC CGAGGACCTC GATCACTTCG GCATCCGCCA ATGGCACATC 
GGCCTGATCG TGCCGGTGGG CTTCGCCCTG GTGTTCATCC GCTTCGCCGA GATCCTCGTG 
CGCATCCTGC GCAACCGTCA GACCGGCCTG GGCCTGGCCG ACGAGGCCGC CGACGCGCTG 
AAGCTGACCG AGCACGAGGA GCCGAAAGCA TGA
 
Protein sequence
MHALARVWAR LEEGLIAFLL AAMTLVTFVY VVLNNLYTLL YDLADLWEGG NETLLAIGDG 
VLTLAQEMTW SNALTKALFA WLIFLGIAYG VRTAGHLGVD VLVKLASRPV QRVLGVIACL 
ACLGYAGLLC VASYDWVKTL FIAGIGAEDL DHFGIRQWHI GLIVPVGFAL VFIRFAEILV 
RILRNRQTGL GLADEAADAL KLTEHEEPKA