Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5906 |
Symbol | |
ID | 5353857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6099630 |
End bp | 6100625 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640814951 |
Product | c4-dicarboxylate-binding protein |
Protein accession | YP_001351223 |
Protein GI | 152987815 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAGC ACACCGCGAA GGCGCTCGTC TGCGCACTTT CCCTGACCGT CGCCGGAATC GTCCAGGCGG CCGACCCGAT CGTCATCAAG TTCTCCCACG TCGTCGCCGA GCACACGCCC AAGGGCCAGG GCGCGCTGCT GTTCAAGAAA CTGGTGGAGG AACGCCTGCC GGGCAAGGTC AGGGTGGAGG TCTACCCGAA CTCGTCGCTG TTCGGCGATG GCAAGGAAAT GGAAGCCCTG CTGCTGGGCG ACGTGCAGAT CATCGCGCCG TCGCTGGCCA AGTTCGAGCA GTACACCAAG AAACTGCAGA TCTTCGACCT GCCGTTCCTG TTCGACAACA TCCAGGCGGT GGATCGCTTC CAGCAGAGCC CGCAGGGCAA GGAGCTGCTG ACTTCGATGC AGGACAAGGG CATCACCGGC CTCGGCTACT GGCACAACGG GATGAAACAG CTGTCCGCCA ACAAGCCGCT GCGCGAGCCG AAGGATGCTC GCGGCCTGAA GTTCCGCGTG CAGGCCTCCA AGGTGCTCGA GGAACAGTTC AAGGCGGTGC GCGCCAACCC GCGCAAGATG AGCTTCGCCG AGGTCTACCA GGGCCTGCAG ACCGGCGTGG TCAACGGCAC CGAGAACCCC TGGTCGAACA TCTACTCGCA GAAGATGCAC GAGGTGCAGA AATACATCAC CGAATCCGAC CACGGCGTGC TGGACTACAT GGTGATCACC AACACCAAGT TCTGGAACGG CCTGCCGGAA GACGTGCGCG GCGTGCTGGC CAAGACCATG GACGAGGTCA CCGTGGAGGT GAACAAGCAG GCCGAGGCGC TCAACCAGGG TGACAAGCAG CGCATCGTCG AGGCCAAGAC CAGCGAGATC ATCGAACTCA CTCCCGAACA GCGGGCCGAA TGGCGCAAGG CCATGCAGCC GGTGTGGAAG AAGTTCGAAG GCGAGATCGG CGCCGACCTG ATCAAGGCCG CCGAAGCCGC CAACCAGGCC CAATAA
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Protein sequence | MLKHTAKALV CALSLTVAGI VQAADPIVIK FSHVVAEHTP KGQGALLFKK LVEERLPGKV RVEVYPNSSL FGDGKEMEAL LLGDVQIIAP SLAKFEQYTK KLQIFDLPFL FDNIQAVDRF QQSPQGKELL TSMQDKGITG LGYWHNGMKQ LSANKPLREP KDARGLKFRV QASKVLEEQF KAVRANPRKM SFAEVYQGLQ TGVVNGTENP WSNIYSQKMH EVQKYITESD HGVLDYMVIT NTKFWNGLPE DVRGVLAKTM DEVTVEVNKQ AEALNQGDKQ RIVEAKTSEI IELTPEQRAE WRKAMQPVWK KFEGEIGADL IKAAEAANQA Q
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