Gene PSPA7_5903 details

Gene Information

• Locus tag: PSPA7_5903
• Symbol: rfbC
• ID: 5357112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 6095558
• End bp: 6096103
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640814948
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001351220
• Protein GI: 152987706
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCGA CCCGCCTGGC GATTCCCGAC GTGATCCTCT TCGAACCCAG GGTGTTCGGC 
GACGACCGCG GCTTCTTCTT CGAAAGCTAC AACCAGCGCG CGTTCGAGGA AGCCTGCGGC 
CATCCGGTCA GCTTCGTCCA GGACAACCAT TCGCGCTCGG CCCGTGGTGT CCTCCGCGGC 
CTGCACTACC AGATCCAGCA GGCCCAGGGA AAGCTGGTGC GCGCCACCCT CGGCGAGGTG 
TTCGACGTGG CCGTCGACCT GCGGCGCGGC TCGCCGACCT TCGGCCAGTG GGTCGGCGAG 
CGGCTGAGCG CGGAGAACAA GCGGCAGATG TGGATCCCGG CCGGCTTCGC GCACGGTTTC 
GTGGTGCTCA GCGAATACGC CGAGTTCCTC TACAAGACCA CCGACTTCTG GGCGCCGGAA 
TACGAGCGCA GCATCGTCTG GAACGACCCC GACCTGAAGA TCGACTGGCC GCTGCGGGAA 
GCCCCGCTGC TCTCCGAGAA GGACCGCCAG GCCAAGGCCT TCGCCGAGGC CGACTACTTC 
CCCTGA 

 

Protein sequence

MKATRLAIPD VILFEPRVFG DDRGFFFESY NQRAFEEACG HPVSFVQDNH SRSARGVLRG 
LHYQIQQAQG KLVRATLGEV FDVAVDLRRG SPTFGQWVGE RLSAENKRQM WIPAGFAHGF 
VVLSEYAEFL YKTTDFWAPE YERSIVWNDP DLKIDWPLRE APLLSEKDRQ AKAFAEADYF 
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