Gene PSPA7_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5900 
SymbolrfbB 
ID5354325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6092717 
End bp6093775 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID640814945 
ProductdTDP-D-glucose 4,6-dehydratase 
Protein accessionYP_001351217 
Protein GI152986443 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTC TCGTGACCGG CAGCGCCGGC TTCATCGGCG CCAATTTCGT GCTCGACTGG 
CTGGCCCTGC ATGACGAGCC GGTGGTCAGC CTCGACAAGC TCACCTACGC CGGCAACCGG
CAGAACCTCG CCAGCCTCGA CGGCGACGCC CGGCATACCT TCGTCGCCGG CGATATCGGC
GATAGCCAGT TGGTAGCCCG CCTGCTCGCC GAGCACCAGC CGCGGGCGAT CCTCAACTTC
GCCGCGGAAT CCCATGTGGA CCGCTCGATC CACGGCCCCG AGGACTTCAT CCAGACCAAC
ATCGTCGGCA CCTTCCGCCT GCTGGAAGAA GTGCGCGCCT ACTGGGGCGC GCTGGAGCCG
GAAGCGAAGG CGGCATTCCG CTTCCTCCAT GTTTCCACCG ACGAAGTCTA TGGCTCGCTG
GCACCGAGCG ACCCGGCCTT CACCGAGAAC AACCGCTACG AGCCGAACAG CCCCTACTCG
GCGTCAAAGG CGGCCTCCGA CCACCTGGTG CGGGCCTACC ACCACACCTA TGGGCTGCCG
GTGCTGACCA CCAACTGCTC GAACAATTAC GGCCCCTACC ACTTCCCGGA AAAGCTCATC
CCACTGGTGA TCCACAACGC CCTGGCCGGC AAGCCGCTGC CGATCTACGG CGACGGCCAG
CAGATCCGCG ACTGGCTCTA CGTCAAGGAC CATTGCAGCG CCATCCGCCG GGTCCTGGAA
GCCGGCCAGT TGGGCGAGAC CTACAACGTC GGCGGCTGGA ACGAAAAGGC CAACCTCGAC
GTGGTCGAGA CCCTCTGCGC CATCCTCGAC CAGGAGCAAC CGCGCGCCGA TGGCCACAGC
TATCGCGAGC AGATCACCTT CGTCAAGGAT CGCCCGGGCC ACGATCGCCG CTACGCCATC
GATGCCACGC GCCTGGAGCG CGAGCTGGGC TGGAAGCCGG CGGAAACCTT CGAGACCGGC
ATCCGCAAGA CCGTGCGCTG GTATCTGGAC AACCAGGACT GGGTGGCCAA CGTGACCAGC
GGTGCCTACC GCGAGTGGGT GGGTAAGCAG TACGCATGA
 
Protein sequence
MTILVTGSAG FIGANFVLDW LALHDEPVVS LDKLTYAGNR QNLASLDGDA RHTFVAGDIG 
DSQLVARLLA EHQPRAILNF AAESHVDRSI HGPEDFIQTN IVGTFRLLEE VRAYWGALEP
EAKAAFRFLH VSTDEVYGSL APSDPAFTEN NRYEPNSPYS ASKAASDHLV RAYHHTYGLP
VLTTNCSNNY GPYHFPEKLI PLVIHNALAG KPLPIYGDGQ QIRDWLYVKD HCSAIRRVLE
AGQLGETYNV GGWNEKANLD VVETLCAILD QEQPRADGHS YREQITFVKD RPGHDRRYAI
DATRLERELG WKPAETFETG IRKTVRWYLD NQDWVANVTS GAYREWVGKQ YA