| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5886 |
|---|
| Symbol | |
|---|
| ID | 5358508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 6079810 |
|---|
| End bp | 6080892 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640814931 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351205 |
|---|
| Protein GI | 152984304 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAC CCCTCTCTGG CCCGCCTCCG ATCCGCACCG CGCTGATCGG CTACGGCTTC
GCCGGCAAGA CCTTCCACGC CCCGCTGATC CGCGCGGTGC CTGCGCTGCG CCTGGAGCGC
GTGGTCTCGC ACGACGCCGG GCGGGTGCAC GCCGACCTGC CCGAAGCCCG GGTCAGCGCC
GATCCGGATG AAGCCATCGA GGCCGTCGAC ATCGACCTGG TGGTCATCGC CTCGCCCAAC
GCCACCCACG CCGACCTCGC CGAACGGGCC TTGCGCGCCG GCAAGCACGT GGTGGTGGAC
AAGCCGTTCA CCGTCACCCT GGCCGAAGCC CGGCGCCTCG CCGACCTCGC CCGCGAGCGG
CCTGGGCAGA TGCTCTCGGT GTTCCAGAAC CGCCGCTTCG ACAGCGACTT CCTCGCCGTG
GAGGCCGCCT TGCAGGCCGG CAGCATCGGC CCGGTACGCT ACTTCGAATC GGCCATCGAG
CGCTTCCGCC CGCAGGTCCG CGACCGCTGG CGCGAACACG ACCTGCCCGG CTCCGGGCTG
TGGTTCGACC TCGGCCCGCA CCTGCTCGAC CAGGCGCTGT GCCTGTTCGG CGTACCGCAG
CGGGTGCACG GCCACCTGCG CCGGCTGCGC GAGGGCGCGC TGACCGACGA CTGGTTCGAG
GTCCTGCTCG ACTATCCGCA CTGCCAGGTG GCGCTGCGCG CCAGCATGCT CGCCGCCAAT
CCGGCGCCAC GCTTCAATGT GCACGGCGAC CACGGCAGCC TGCTCAAGGC CGGCGCCGAC
ATCCAGGAAG CGCAGTTGCT CCAGGGCCTG TGCCCCGGCT CCGCCGGCTG GGGCCGCGAT
CCCGACCTGC TGCAGCACAT CGACGGCCAG GGCCTGCGCC AGTCGCTGGT CACCCCGGCC
GGCGACCAGA GCCGCTACTA CCAGGCGCTG GCCGCCGCCA TCCGCGGCCA GTCGGACAAC
CCGGTGTCGG CGGAACAGGC CTGCGCGCTG ATGGCCCTGC TGGAGTTGGC ACGACGCTCC
GCCGAGGAAG GCCGGGGCCT GCCGGTGGAA CTGCGCGACG AGGAACGCCA GGCCTGGAAC
TGA
|
|---|
| Protein sequence | MTPPLSGPPP IRTALIGYGF AGKTFHAPLI RAVPALRLER VVSHDAGRVH ADLPEARVSA
DPDEAIEAVD IDLVVIASPN ATHADLAERA LRAGKHVVVD KPFTVTLAEA RRLADLARER
PGQMLSVFQN RRFDSDFLAV EAALQAGSIG PVRYFESAIE RFRPQVRDRW REHDLPGSGL
WFDLGPHLLD QALCLFGVPQ RVHGHLRRLR EGALTDDWFE VLLDYPHCQV ALRASMLAAN
PAPRFNVHGD HGSLLKAGAD IQEAQLLQGL CPGSAGWGRD PDLLQHIDGQ GLRQSLVTPA
GDQSRYYQAL AAAIRGQSDN PVSAEQACAL MALLELARRS AEEGRGLPVE LRDEERQAWN
|
|---|
| |