| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5882 |
|---|
| Symbol | |
|---|
| ID | 5353778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 6074940 |
|---|
| End bp | 6076046 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640814927 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351201 |
|---|
| Protein GI | 152984457 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA TCGACGTACT GGTGATCGGC GCCGGAGTCC TCGGCCTGGC CTGCGCCGCG
CGCCTGGCCG AAGCCGGCCA CGGTGTACTG GTGGCGGAGC GCGAACGCCT GGCCGGCAGC
CACACCTCCA GCCGCAACTC CGAAGTCATC CACGCGGGCC TCTATTACCC ACCCGGCTCG
CTCAAGGCCG AACTCTGCGT CGAGGGCCGC GAACGCCTGT ATGTCTGGTG CGCGCGCCAC
GGCGTCGGCC ACCGGCGCAT CGGCAAGCTG CTGGTGGCGG TGGCGGACGG CGAGCGGGAA
AAGCTCCAGG CCCTGCATGA CAATGCCCGT GCCTGCGGGG TCGACGACCT GTCGCCATTG
GACGGCGCCG GTCTGCGTGG ACTGGAACCG CAGGTCCGTG GCGTAGCCGC GCTGTTCTCG
CCGAGCACCG GGATCATCGA CAGCCATGCC TTCCTGCAGT CCCTGCAGGC CGCCGCCGAG
CGCCGAGGCG CACAGCTGGC GCTGGACACC CGGGTCGACT GCCTGGAGCG TCGCGACGGC
GGCTGGCACG CCGAAGGCCG GAGCGTCGGC GAACCCTTCC AGTTGCGCGC GGGATGGGTG
ATCAATGCCG GCGGCCTGTT CGCCCAGGAA CTGGCGCAAC GCACCGAAGG CCTCGACCCA
GCCCTGGTGC CCACCCTGCA CCTGTGCCGG GGCCGCTACT TCTCCTACAG CGGCCGCTCG
CCGTTCCGCC ACCTGGTCTA CCCGATGCCC GAGGCTCGCA CCGCCGGCCT CGGCATCCAC
GCCACCCTCG ACCTCGGCGG CCAGCTGCGC TTCGGTCCCG ACGTCGATTA CCTCGAGCGG
GTCGACTACC GCGTCGACGA ATCCCTGCGC CAGCCCTTCG CCCAGGCCAT CTCGCGCTAT
TTCCCCGGCC TCGACCCACG CCGCCTGGTG GCCGGCTACG CCGGTATCCG GCCCAAGCTC
GGCGGGCCCG GGGAACCCGC CGCCGACTTC GTCCTCCAAA CCCCTGCCGA GCACGGCCTG
CCCGGCCTGG TCAACCTGTT CGGCATCGAG TCGCCGGGCC TCACCGCCAG CCTGGCGCTC
GCCGAGCGGG TCGCGCGGGC GCTCTGA
|
|---|
| Protein sequence | MNDIDVLVIG AGVLGLACAA RLAEAGHGVL VAERERLAGS HTSSRNSEVI HAGLYYPPGS
LKAELCVEGR ERLYVWCARH GVGHRRIGKL LVAVADGERE KLQALHDNAR ACGVDDLSPL
DGAGLRGLEP QVRGVAALFS PSTGIIDSHA FLQSLQAAAE RRGAQLALDT RVDCLERRDG
GWHAEGRSVG EPFQLRAGWV INAGGLFAQE LAQRTEGLDP ALVPTLHLCR GRYFSYSGRS
PFRHLVYPMP EARTAGLGIH ATLDLGGQLR FGPDVDYLER VDYRVDESLR QPFAQAISRY
FPGLDPRRLV AGYAGIRPKL GGPGEPAADF VLQTPAEHGL PGLVNLFGIE SPGLTASLAL
AERVARAL
|
|---|
| |