Gene PSPA7_5850 details

Gene Information

• Locus tag: PSPA7_5850
• Symbol: typA
• ID: 5356931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 6045660
• End bp: 6047477
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640814895
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_001351169
• Protein GI: 152986941
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0948932
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAA ATCTGCGCAA CATCGCCATC ATCGCCCACG TCGACCATGG CAAGACCACC 
CTGGTGGACA AGCTGCTGAA GCTGTCCGGC ACCCTCGACC GCAAGGAAGC GGAAAGCGAG 
CGGGTGATGG ACTCCAACGA CCAGGAAAAA GAGCGTGGCA TCACCATCCT GGCGAAGAAC 
ACCGCGATCA AGTGGAACGG CTACAACATC AACATCGTCG ATACCCCCGG CCACGCCGAC 
TTCGGCGGCG AGGTGGAGCG CGTGATGTCG ATGGTCGACT CCGTGCTGCT GGTGGTCGAC 
GCCCAGGACG GCCCCATGCC GCAGACCCGC TTCGTGACCC AGAAGGCGTT CAAGGCCGGC 
CTGCGTCCGA TCGTGGTGGT GAACAAGATC GACCGTCCGG GCGCGCGTCC GGACTGGGTC 
ATCGACCAGA TCTTCGACCT GTTCGACAAC CTCGGCGCCA CCGACGAGCA ACTCGACTTC 
CCGATCGTCT ACGCCAGCGC CCTGAACGGC ATCGCCGGCC TCGACCACGA GAAGATGGAC 
GACAACATGG ACGCGCTGTT CCAGGCGATC ATCGACCACG TCCCGGCCCC GGTGGTGGAC 
ACCGAGGGTT CGTTCCAGAT GCAGATCTCG CAGCTGGACT ACAACAGCTT CCTCGGCGTG 
ATCGGTATCG GTCGCATCAC CCGCGGCAAG GTCAAGTCCA ACACCCCGGT GGTAGCGATC 
AGCGACGACG GCAGCAAGCG CAACGGCCGC ATCCTGAAGA TCATGGGCCA CCATGGCCTG 
CAGCGCGTCG AGGTGGCCGA GGCGGAAGCC GGCGACATCG TCTGCGTCAG CGGCATGGAG 
GAGCTGTTCA TCTCCGACAC CCTGTGCGAC CCGCAGAACG TCGAGGCGCT GCCGCCGCTG 
ACCGTCGACC AGCCGACCGT GAGCATGACC TTCCAGGTCA ACGACTCGCC GTTCGCCGGC 
CGCGAAGGCA AGTTCGTCAC CAGCCGCAAC ATCAAGGAGC GCCTGGAGAA GGAGCTGCTG 
CACAACGTGG CGCTGCGCGT CGAGCAGGGC GACAGCCCGG AGAAGTTCAA GGTTTCCGGC 
CGCGGCGAGC TGCACCTGTC GGTTCTGATC GAGACCATGC GCCGCGAAGG CTTCGAGCTG 
GCCGTGGGCC GCCCGGAAGT GGTGATCATC GAGAAGGACG GCGTGAAGCA GGAACCCTAC 
GAGAACGTCT CCATCGACAT CGAGGAGCAG CACCAGGGCC CGGTGATGGA GCAGATGGGC 
CTGCGCAAGG GCGACATGAC CAACATGATC CCCGACGGCA AGGGTCGCCT GCGCCTGGAA 
TACGTGATCC CGGCCCGTGG CCTGATCGGT TTCCGCAACG CCTTCCTGAC CATGACCTCG 
GGCACCGGCA TCCTGACCTC GACCTTCGAC CACTACGGTC CGGTCAAGGC CGGCGACGTC 
GCCCACCGCC AGAACGGCGT GCTGGTCTCC ATGGCTACCG GTACCGCGCT GACCTACTCC 
CTGGAAACCC TGCAGGACCG CGGCAAGCTG TTCCTCTCCC CGGGCGACGA AGTCTACGAA 
GGCCAGCTGG CCGGCATCCA CAGCCGCGAC AACGACCTGG TGATCAACCC GACCAAGGCC 
AAGAAGCTCG ACAACATGCG CGCTTCCGGC AAGGACGAGA CCATCCAGCT GACCCCGGCG 
CTGAAGTTCA CCCTCGAGCA GGCCCTGGAG TTCATCGACG AAGACGAGCT GGTGGAAGTG 
ACGCCGAAGT CGATCCGCCT GCGCAAGAAA CTGCTCAACG AGAACGATCG CAAGCGCTAC 
GAGCGCAGCA AGGTCTAA 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLKLSG TLDRKEAESE RVMDSNDQEK ERGITILAKN 
TAIKWNGYNI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AQDGPMPQTR FVTQKAFKAG 
LRPIVVVNKI DRPGARPDWV IDQIFDLFDN LGATDEQLDF PIVYASALNG IAGLDHEKMD 
DNMDALFQAI IDHVPAPVVD TEGSFQMQIS QLDYNSFLGV IGIGRITRGK VKSNTPVVAI 
SDDGSKRNGR ILKIMGHHGL QRVEVAEAEA GDIVCVSGME ELFISDTLCD PQNVEALPPL 
TVDQPTVSMT FQVNDSPFAG REGKFVTSRN IKERLEKELL HNVALRVEQG DSPEKFKVSG 
RGELHLSVLI ETMRREGFEL AVGRPEVVII EKDGVKQEPY ENVSIDIEEQ HQGPVMEQMG 
LRKGDMTNMI PDGKGRLRLE YVIPARGLIG FRNAFLTMTS GTGILTSTFD HYGPVKAGDV 
AHRQNGVLVS MATGTALTYS LETLQDRGKL FLSPGDEVYE GQLAGIHSRD NDLVINPTKA 
KKLDNMRASG KDETIQLTPA LKFTLEQALE FIDEDELVEV TPKSIRLRKK LLNENDRKRY 
ERSKV