| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5809 |
|---|
| Symbol | tatC |
|---|
| ID | 5356141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5999633 |
|---|
| End bp | 6000436 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640814854 |
|---|
| Product | twin arginine-targeting protein translocase TatC |
|---|
| Protein accession | YP_001351128 |
|---|
| Protein GI | 152988364 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG AAAAACCCGA ACAGCCCGAG CACGACCAGG AAATGCCGCT GGTCTCGCAC
CTGACCGAAC TGCGCACCCG CCTGCTGCGC AGCGTGGCGG CGATCTTCCT GATCTTCGCC
GGCCTGTTCT ATTTCTCGCA GAAGATCTAC ACCCTGGTCT CCGAGCCGCT GCGCCGCTTC
CTCCCGGAAG GCACCAGCAT GATCGCCACC GACGTCGCCT CGCCGTTCCT CGCGCCGTTC
AAGCTGACCA TGGTGGTGGC GCTGTTCCTG GCGATGCCGG TGATCCTCGC GCAGGTCTGG
GGCTTCATCG CCCCCGGCCT GTACAAGCAC GAGAAGCGCG TGGCGCTGCC GCTACTGGTG
TCCAGCATCA TCCTGTTCTA CGCCGGGATG GCCTTCGCCT ACTTCCTGGT GTTCCCGATG
ATCTTCCACT TCTTCGCCAG CGTGACCCCC GAGGGCGTGG CGATGATGAC GGACATCAAC
AGCTACCTGG ACTTCGTCCT GACCCTGTTC TTCGCCTTCG GCGTCGCCTT CGAGATCCCG
GTGGCCACCG TGCTGCTGAT CTGGATCGGG GTGGTCGACG TCGAGTACCT GAAGAAGATC
CGTCCGTACG TGATCATCGG CTGCTTCGTG GTCGGCATGG TCCTGACCCC GCCGGACATC
TTCTCCCAGA CCATGCTCGC GGTGCCGATG TGGCTGCTGT TCGAGATCGG CCTGCTGTTC
GGCCGCCTGG TACGCAAGCG CGGCGAGCAT CCGGACGACC AACCGGCCAG CGACGGCGAC
CAGCCCCCGG CCACCCGCCA GTGA
|
|---|
| Protein sequence | MSAEKPEQPE HDQEMPLVSH LTELRTRLLR SVAAIFLIFA GLFYFSQKIY TLVSEPLRRF
LPEGTSMIAT DVASPFLAPF KLTMVVALFL AMPVILAQVW GFIAPGLYKH EKRVALPLLV
SSIILFYAGM AFAYFLVFPM IFHFFASVTP EGVAMMTDIN SYLDFVLTLF FAFGVAFEIP
VATVLLIWIG VVDVEYLKKI RPYVIIGCFV VGMVLTPPDI FSQTMLAVPM WLLFEIGLLF
GRLVRKRGEH PDDQPASDGD QPPATRQ
|
|---|
| |