Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5787 |
Symbol | priA |
ID | 5359696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5979906 |
End bp | 5982125 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640814832 |
Product | primosome assembly protein PriA |
Protein accession | YP_001351106 |
Protein GI | 152984073 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGACC TGATCCTACG CCTCGCCCTG CCTTCGCCCC TCCGACGCCT GTTCGACTAT CGGGCGCCAC GCGGGATTCC ACGCAGCGCC CTGCAACCGG GGATACGCCT GCTGGTGCCG TTCGGGCGCC GCGAGATGAT TGGCGTTCTG ATAGAGGTGA CGGACCGTTC CGAAGTGCCG GAGGACAAGC TCAAGCCGGC GCTCAGGGTG CTCGACGCCA AGCCGCCGAT GCCCGCCCAC CTGCTCGAGC TATGCCGCTG GACCGCCCAG TACTACCAGC ACAGCCTCGG CGACAGCCTG TCCTGGGCGC TGCCCAACCT GCTGCGCCAG GGCGAGCCGG CCGAGGCCCG CCAGCAGCGT TTCTGGCACG CCGTCGAGCA ATCCAGCCTC GACGACCCGC GCCTGGCCCG CGCGCCGCGC CAGCGTCAGG CCCTGGCGAT TCTCAAGCAG CATCCGCACG GGGTTTCCCA TGAGTTGCTG AACCAGCTGG AGATAAACAA GGACAGCCTC GACCTGCTCA AGGAAAAAGG CCTGGTCGAA CTGGAGGTGC GGCGCCACAA CACCCCGCCG CGCGAAGGCG GCTGGCTGGC CCAGGCGGAG CTGCCGCTGA ACCCCGAGCA GCGCGCCGCC TTCGAGGCGG TCCGCGCCAG CCACGGCAGC TTCCACTGCT TCCTTCTGGC TGGCGTCACC GGCAGCGGCA AGACCGAGGT CTATCTGCAA CTGATCCGCG AGACCCTGGC CGCCGGCCGC CAGGCGCTGG TACTGATTCC CGAGATCAAC CTCGGCCCGC AGACCCTGGC CCGCTTCGAG CGGCGCTTCA ACGCGCGCAT CGCCCTGCTG CACTCGGCCC TGACCGACCG CGAGCGCCTC GACGCCTGGC TCGCCGCACG GGATGGCGAG GCCGATATCG TCATCGGCAC CCGCTCGGCG CTGTTCACTC CGCTGAAGCG TCCGGGACTG ATCATCGTCG ACGAGGAACA CGACGCCTCC TATAAACAGC AGGACGGCCT GCGCTACCAC GCCCGCGACC TGGCGCTGGT GCGCGCGCGC CTGGAGAACG TGCCGATCCT ACTCGGCTCG GCCACTCCCG CCCTGGAAAG CCTGCACAAC GCCCAGGCCG GCCGCTACGG CCTGCTGCGC CTGACCCAGC GCGCCGGCGG TGCCCAACCG CCGAAGTTCA TTCGCCTCGA CGTGAAGAGC ATGCCGCTCG ACGCCGGGCT TTCCCGGCCC CTGCAACAGG CCATCGGCGA CACCCTGGCG GCCGGCCAGC AGGTGCTGGT GTTCCTCAAC CGCCGCGGTT TCGCCCCGAC CCTGCTGTGC CACGACTGCG GCTGGATCAG CCAGTGTCCG CGCTGCGACG CGCGGATGAC CGTGCACCAG GGCAGCGGTG AGCTGCGCTG CCACCACTGC GACCATCGCC AGCGCCCACC GATGAACTGT CCGCAATGCG GCAAGCTCGA CCTGCGCCCG GTGGGCGCCG GTACCGAGCG CGCCGAGGAG CGCCTGCGGA TTCTATTCCC GCATCATCCG GTGCTGCGCA TCGACCGCGA CAGCACCTCG CGCAAGCACG CCATGCGCGA CCTCTTCGCT ACCATCAACA GCGGCGAGCC ATGCATCCTG GTCGGCACCC AGATGCTCGC CAAGGGTCAT CACTTCCCGC GGGTCACCCT GGTGGCGATC CTCGACGCCG ATGGCGGCCT GTTCTCCGCC GACTTCCGCG CCAGCGAACG CATGGCCCAG CAGATCGTCC AGGTCGCCGG CCGCGCGGGG CGCGCCGAGG AACCCGGGCG GGTACTGATC CAGACCCACC TGGCCGACCA CCCGCTGCTG GTCCAGCTCA CCGAAGACGG CTACTTCGCC TTCGCCGAGC AGGCCCTCAG CGAGCGCCGC GCCGCCGGCC TGCCGCCCTT CGCCCACCTC GCCCTGCTGC GCGCCGAGGC GCACAAGCCG GGCCAGGCGG AAGCCTTCCT CGACAGCGCC TGCGGCGCCG CCGAGCAACT GCTGGAGCAG ATCGGCGGTC CGGAGGTGGA ACTGCTCGGA CCGGTGCCGG CGCCCATGGA GCGGCGCGCC GGCAAGCACC GCGCGCAGTT GCTGCTGCAG TGCATGAGCC GGGCGCCGTT GCACCGCCTG CTGGCGCCCT GGCTGCAAGC CCTCGAACAG CTACCCGGCG GACGCCAGGT ACGCTGGTCG CTGGACGTGG ATCCGATCGA CCTTTTCTGA
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Protein sequence | MSDLILRLAL PSPLRRLFDY RAPRGIPRSA LQPGIRLLVP FGRREMIGVL IEVTDRSEVP EDKLKPALRV LDAKPPMPAH LLELCRWTAQ YYQHSLGDSL SWALPNLLRQ GEPAEARQQR FWHAVEQSSL DDPRLARAPR QRQALAILKQ HPHGVSHELL NQLEINKDSL DLLKEKGLVE LEVRRHNTPP REGGWLAQAE LPLNPEQRAA FEAVRASHGS FHCFLLAGVT GSGKTEVYLQ LIRETLAAGR QALVLIPEIN LGPQTLARFE RRFNARIALL HSALTDRERL DAWLAARDGE ADIVIGTRSA LFTPLKRPGL IIVDEEHDAS YKQQDGLRYH ARDLALVRAR LENVPILLGS ATPALESLHN AQAGRYGLLR LTQRAGGAQP PKFIRLDVKS MPLDAGLSRP LQQAIGDTLA AGQQVLVFLN RRGFAPTLLC HDCGWISQCP RCDARMTVHQ GSGELRCHHC DHRQRPPMNC PQCGKLDLRP VGAGTERAEE RLRILFPHHP VLRIDRDSTS RKHAMRDLFA TINSGEPCIL VGTQMLAKGH HFPRVTLVAI LDADGGLFSA DFRASERMAQ QIVQVAGRAG RAEEPGRVLI QTHLADHPLL VQLTEDGYFA FAEQALSERR AAGLPPFAHL ALLRAEAHKP GQAEAFLDSA CGAAEQLLEQ IGGPEVELLG PVPAPMERRA GKHRAQLLLQ CMSRAPLHRL LAPWLQALEQ LPGGRQVRWS LDVDPIDLF
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