Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5785 |
Symbol | |
ID | 5353953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5978688 |
End bp | 5979455 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640814830 |
Product | putative nuclease |
Protein accession | YP_001351104 |
Protein GI | 152987043 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.397198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGCCT TTTTCATGTC CGTGATTTCT GTCGCCGCCG GCGCGGCGGA GGCCTGCCGT CCCACCGGGA CCTTGCAGAG CGTCGAGGTG GCGCGGGTGG TGGACGGTGA CACCGTGCGC CTGCGCGACG GCCGGAGTGT GCGGCTGATC GGCATCAACG CGCCTGAACT GGCGCACAAC GGCCGTACCA CCGAACCTTA CGCCGAAGCC GCGAAGCAGC GCCTGCAGGC GCTGGTGACG GCCGGCGGCG GGCGTCTCGG CCTGCAGCCG GGGCGTCAGG CCCGCGATCA CTACGGCCGG ACCCTGGCGC ACCTGTTCGA CGCCAGTGGC GGCAATCTCG AGGCACGCCT GCTCGGCGAA GGCCTCGGCT ATCTGGTGGC GGTGGCGCCG AACACCGAGC TGACGGCCTG TCAGCAAGCC GCTGAACGTG CCGCGCGATC GGCTAATCTG GGAGTGTGGA AGCGTTCGCC GGTGCTGTCG GCGGAGCAAC TGTCGCAGAG CGGTTTCGCC GTGGTTCGCG GACGGGTGCT CGAGGTCGAG CGCAACCGGG GTGGCATCTG GCTGGAAATG GACGGTCCGC TGGTCCTGCG GATCGAGCCG AAGGTGCTCA AGGCATTCGA TGCGAAGCGG GTGATGCAGA TGGCGGGGCG TTCTCTGGAA GTGCGTGGCT GGGTTGTCGA CCGTTCCCGG CGGGGCGCGG TGCCGGCCGG CAAGGCGCGC TGGCAGTTGT CGGTGACCGA CCCGGCGATG CTGGAGTGGC TTCCATGA
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Protein sequence | MGAFFMSVIS VAAGAAEACR PTGTLQSVEV ARVVDGDTVR LRDGRSVRLI GINAPELAHN GRTTEPYAEA AKQRLQALVT AGGGRLGLQP GRQARDHYGR TLAHLFDASG GNLEARLLGE GLGYLVAVAP NTELTACQQA AERAARSANL GVWKRSPVLS AEQLSQSGFA VVRGRVLEVE RNRGGIWLEM DGPLVLRIEP KVLKAFDAKR VMQMAGRSLE VRGWVVDRSR RGAVPAGKAR WQLSVTDPAM LEWLP
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