| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5784 |
|---|
| Symbol | |
|---|
| ID | 5358966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5977252 |
|---|
| End bp | 5978691 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640814829 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001351103 |
|---|
| Protein GI | 152987518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4784] Putative Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCG TCTGGCTCCT GATGCTGGTG CTGGGAGTCG CGACGCTGGG CGGTTGCGCG
GTGAACCCGG CCACCGGCAA GAGCGACTTC GTGATGATGA GCGAGCAGCA GGAGCTCGGC
ATGGGCGCCC GCTACAACCA GGAAATCCTC AAGCAGTTCC CCCGCTACAA TGACGAAAAA
CTCCAGGCCT ACGTGCAGAG GGTCGGCGAG CGGGTCGCGC GCAGCAGCCA TCGCAGCAAC
CTGCAGTACC ACTTCACCGT CATCGACTCG CCGGACATCA ACGCCTTCGC CCTGCCGGGC
GGCTACATCT ATATCCATCG CGGACTGATC GCCTACCTCG GCTCCGAGGC CGAGCTGGCC
GCGGTGCTCG GCCACGAGGT CGGCCACGTC ACGGCGCGTC ACAGCGTGCG CCAGCAGAGC
CAGGCCAGCG CCTGGAACAT CCTCGGCCAG GCGGTGGCGA TCGGTACCGG CGTCGGTGCC
GCCGGCGACC TGGCGAACGT GCTCGGCACC GCCTTCGTCC GCGGCTATGG CCGTGACATG
GAGCTGGAGG CCGATGGGCT GGGAGCCCAG TACCTGGCCC GCGCCGGCTA CGATCCGACG
GCGATGATCC AGGTGGTGCG GGTGCTGAAG AACCAGGAAG ACTTCGCCCG CGCGGAGGCG
GCGCGCAATG GCCAGGCGGT GCAGGCCGGC GGTTACCACG GCCTGTTCGA CACCCACCCG
GACAATGACC GGCGCCTGCA GCAGGTGGTC GGTCCGGCGC GGCAACTGGC CAACGGACAG
CAGGAAGTCG GCCGCGACGT GTTCCTCCGC CACCTGGAGG GCCTGCCCTT CGGCGACTCG
GCCGCGGCCG GGGTGCGTCG CGGGCAGAAT TTCTACCATG CCGAGCTGGA CTTCACCCTG
AGCTATCCGG CGGGCTGGAA GATCCTCAAC CAGCCGAGCG CCCTGCTCGG CTATCCGGCG
GACGAGCAGT CGTTCATCGG CATGAAGCTG GTGCCCCATG ATGCCCGCCT GACGCCCGCG
GAGTTCCTGC GCAAGAACGC CGGGCAACGG CTGGCCCGGG AAGAGTCGCT GCAGCAGGCC
GGGCTGAACG GCTACACGGC GGTGGTGCCA GGCAACCCGG CGCGGCGGGT GGCGGTGATC
TACCAGGGCG ACCGGGCCTA CCTGTTCGTC GGCGTGGTCA AGGTCGGTTC CCTGGAGACC
CAGGACGACC GCTTCCTCGG CGTGATCCGC AGCTTCCGTC CGCTGCGCGA CAAGGAGCGG
GCCCTGGCGC AGCCGCGACG CCTGCACCTG GTGCAGGTCA AGGCGGGGCA GACGCTGGAG
CGATTGGCGG CTGGTGGCGA GGGGTCATTG AGTGACTCCG TGGCTCGCCT GCGTCTGCTG
AATGACCTTT ATCCGAGCGG TGAACCCCGT CCGGGCGATT GGCTTAAAGT CGTACGCTAG
|
|---|
| Protein sequence | MRIVWLLMLV LGVATLGGCA VNPATGKSDF VMMSEQQELG MGARYNQEIL KQFPRYNDEK
LQAYVQRVGE RVARSSHRSN LQYHFTVIDS PDINAFALPG GYIYIHRGLI AYLGSEAELA
AVLGHEVGHV TARHSVRQQS QASAWNILGQ AVAIGTGVGA AGDLANVLGT AFVRGYGRDM
ELEADGLGAQ YLARAGYDPT AMIQVVRVLK NQEDFARAEA ARNGQAVQAG GYHGLFDTHP
DNDRRLQQVV GPARQLANGQ QEVGRDVFLR HLEGLPFGDS AAAGVRRGQN FYHAELDFTL
SYPAGWKILN QPSALLGYPA DEQSFIGMKL VPHDARLTPA EFLRKNAGQR LAREESLQQA
GLNGYTAVVP GNPARRVAVI YQGDRAYLFV GVVKVGSLET QDDRFLGVIR SFRPLRDKER
ALAQPRRLHL VQVKAGQTLE RLAAGGEGSL SDSVARLRLL NDLYPSGEPR PGDWLKVVR
|
|---|
| |