Gene PSPA7_5779 details

Gene Information

• Locus tag: PSPA7_5779
• Symbol: pilO
• ID: 5356787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5970840
• End bp: 5971463
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640814824
• Product: type 4 fimbrial biogenesis protein PilO
• Protein accession: YP_001351098
• Protein GI: 152986380
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTGG CCAGTTCCCT GGAAAGTCTG CGCAAGATCG ACATCAACGA TCTCGACCTG 
AACAACATCG GTTCCTGGCC GGCGGCGGTC AAGGTCATCG TCTGCGTGCT GCTGACCGCG 
GCGGTGCTTG CGCTGGGCTA CAACTTCCAC CTGAGCGACA TGCAGGCGCA GCTGGAGCAG 
CAGGCCGCGG AGGAGGAGAC GCTCAAGCAG CAGTTCTCCA CCAAGGCCTT CCAGGCCGCG 
AACCTGGAAG CCTACAAGGC GCAGATGAAG GAGATGGAAG AGTCCTTCGG CGCCTTGCTG 
CGGCAACTGC CCAGCGACAC CGAGGTGCCC GGCCTGCTCG AGGACATCAC TCGCACCGGA 
CTGGGCAGCG GGCTGGAGTT CGAGGAGATC AAGCTGCTCC CCGAGGTCAC CCAGCAGTTC 
TACATCGAGC TGCCGATCCA GATCAGCGTG GTCGGTGGCT ATCACGACCT GGCGACCTTT 
GTCAGCGGCG TCTCCAGTCT GCCGCGGATC GTCACCCTGC ATGACTTCGA GATCAAGCCG 
GTCGAGCCCG GCAGTACGTC CAAGCTGCGC ATGAGCATCC TGGCCAAGAC CTACCGCTAC 
AACGACAAGG GGCTGAAGAA ATGA 

 

Protein sequence

MSLASSLESL RKIDINDLDL NNIGSWPAAV KVIVCVLLTA AVLALGYNFH LSDMQAQLEQ 
QAAEEETLKQ QFSTKAFQAA NLEAYKAQMK EMEESFGALL RQLPSDTEVP GLLEDITRTG 
LGSGLEFEEI KLLPEVTQQF YIELPIQISV VGGYHDLATF VSGVSSLPRI VTLHDFEIKP 
VEPGSTSKLR MSILAKTYRY NDKGLKK