| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5746 |
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| Symbol | rfaC |
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| ID | 5356757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5922663 |
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| End bp | 5923730 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814791 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001351065 |
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| Protein GI | 152989560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.887327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTGC TGCTGGTCAA GACTTCGTCC CTCGGCGACG TGATCCATAC CCTGCCGGCG
CTTACCGACG CCGCCCGGGC GCTTCCCGGC ATCCAGTTCG ACTGGGTGGT GGAGGAAGGC
TTCGCCGAGA TTCCCGCCTG GCATCCGGCG GTGGCGCGGG TGATCCCGGT GGCCATCCGG
CGTTGGCGCA AGAACCTCTG GCAGACCCTG CGCAACGGCG AATGGCGGCG CTTCAAGCAG
CGTCTTGAGG AAGTCGACTA CGATCTGGTG ATCGATGCCC AGGGCCTGCT GAAAAGTGCC
TGGCTGACCC GCTACGCGGG CAGGGCCCCG GTCGCCGGCC TCGATCGCGA TTCGGCGCGC
GAACCGCTGG CCAGCCGCTT CTATCGGCGT GTCTACCCGG TGGCCTGGGG GCAGCACGCG
GTGGAGCGTA CCCGCCAGTT GTTCGCCCAG GCGCTGGATT ATCCCCTGCC CGATTCGGTC
GGCGACTACG GCCTGGATCG CGAGCAACTG GCCGACGCCG ATGCCGGCGC GCCCTATCTG
GTGTTCCTGC ATGGCACCAC CTGGGCCACC AAGCACTGGC CGGAAGCCTA CTGGCGCGAA
CTGGCCGAGC GCATGTGCGA GCGCGGCTGG TCGGTGCGCC TGCCCTGGGG CAGCGCCGCC
GAGCGGGAGC GGGCTGAACG GCTGGCCGCA GGGTTGGAAA ATGCCGCGGT GCTCCCCAGA
TTATCGTTGG CCGGCATGGC CAAGGTGCTT GCCGGCGCGC GTGCCTGCGT GGCGGTGGAT
ACCGGGCTCG GCCACCTGGC GGCGGCGCTG GACGTGCCGA CGTTGTCGCT GTTCGGCCCG
ACCAACCCGG GTTTCACCGG TGCCTACGGG CGTTCCCAGG TCCACCTGGG TAGCGACTTC
CCTTGCGCGC CGTGCCTGAA GAAGACCTGT ACCTACCAGC CCACCGAAGA GGACCGCAAA
CTGTTCGACC TCAAGCGTGA ACAGCCGCTG TGCTTCACCC GGCTGAATCC CCAGCGCGTG
GCCACCCAGC TGGAAGCCAT GCTGCTGGCC CCGGAGATGC TCCGATGA
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| Protein sequence | MRVLLVKTSS LGDVIHTLPA LTDAARALPG IQFDWVVEEG FAEIPAWHPA VARVIPVAIR
RWRKNLWQTL RNGEWRRFKQ RLEEVDYDLV IDAQGLLKSA WLTRYAGRAP VAGLDRDSAR
EPLASRFYRR VYPVAWGQHA VERTRQLFAQ ALDYPLPDSV GDYGLDREQL ADADAGAPYL
VFLHGTTWAT KHWPEAYWRE LAERMCERGW SVRLPWGSAA ERERAERLAA GLENAAVLPR
LSLAGMAKVL AGARACVAVD TGLGHLAAAL DVPTLSLFGP TNPGFTGAYG RSQVHLGSDF
PCAPCLKKTC TYQPTEEDRK LFDLKREQPL CFTRLNPQRV ATQLEAMLLA PEMLR
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