Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5734 |
Symbol | |
ID | 5354032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5909187 |
End bp | 5910380 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640814779 |
Product | hypothetical protein |
Protein accession | YP_001351053 |
Protein GI | 152984116 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGCAA TCACCCGACT GGCCCGCCTT CGCCACCCCA CCAGCCATGC GCTTAGCCAC TGGATCCTGC CCCTCGGCTG GCTGGCCCTG CTCACGGGTA TGTTCTGGAT CGGCGACCGC TCCGACTACC ACCGCCTCTT CTATATCCTG CTGGCGGCGC CGACGCTGCT GTACGTGATA CTGCAACCAC GACTGCTTCG CCCGCTGGCC GGCTCGCCGC TGTTCATCGC CTTCCTCGCC TTCAGCGGCT ACATGATGCT CAGCCTCTCC TGGTCGACCC CCGAGAACTC CACCGGCTCG TTGCTCAAGC GCCCTCTGTA TATCGCTCTC CTGTTCTTCT GCGCCGCCAT CCTGGCGCTC GAGGCTCCCC GGCGCCTCAG GACCGCGACC TGGCTGGCGG CCGTGGGAGC GCTCGTCTCG GCCGTTGTAA CCCTGCTTCA GTATCACTGG GACGCCAGTC CGCTACGTCT TACCGGCTAT GGCGCCCTCT ACAATCCATT GCTGAGCGCT CATGTCTATG GCGCGTTCAC AGCCCTGTGG CTGGTCTACT GGATGCAGTC TCGCCACGTC CTGGCGCCCT TGCCACTGCT TTCGCTGGCA GTTCTCGGCG GCCTTCTCGT GGCTACCGGC TCGCGGACCC CCCTGGTCGG ACTCGCAGCC AGCCTGGTCT GGCTGGTCCT GGCCGGAGAC AGGAAAAAAA GCCTCATCGC CCTCGCACTG GCCGTCGCCG GAGCGTTATT GGCCTATGTT CTGTATCCGG AGGCGATCAT CCAGAGGGGA GCCTCCTTCC GCCCGGAAAT CTGGGCCGAC GCCCTGCGCC AGATCGGCGA GCATCCGTGG CTCGGGCACG GATACGATCA CCCGATGCGC ATCGCCCTGA GCAACGGCAT GCTGCTCGCC GATCCGCACA ACATCGAGTT GGGCGTGCTG TTCGCCGGCG GGATCATCGG TCTCCTGCTG TGGCTGGCAA TCTACGCCCT GGCCTTCGCC TTCGCCTGGA AGAACCGGCA ATCTCCCGCC GTTCTGCTGG CTTCGACCTG GCTGGTGTTC GGCCTGGCTT CCGGCCTCAC GGAGGGCAAC GCCTTCCTGC CCCGCCCCAA GGAGCACTGG TTCCTGATCT GGATTCCATT GGCCCTGCTG TACGCCCTGT GGGTGCAGAA AAGCGCCCGC GACAAAAACG AAACCGCCTC CTGA
|
Protein sequence | MFAITRLARL RHPTSHALSH WILPLGWLAL LTGMFWIGDR SDYHRLFYIL LAAPTLLYVI LQPRLLRPLA GSPLFIAFLA FSGYMMLSLS WSTPENSTGS LLKRPLYIAL LFFCAAILAL EAPRRLRTAT WLAAVGALVS AVVTLLQYHW DASPLRLTGY GALYNPLLSA HVYGAFTALW LVYWMQSRHV LAPLPLLSLA VLGGLLVATG SRTPLVGLAA SLVWLVLAGD RKKSLIALAL AVAGALLAYV LYPEAIIQRG ASFRPEIWAD ALRQIGEHPW LGHGYDHPMR IALSNGMLLA DPHNIELGVL FAGGIIGLLL WLAIYALAFA FAWKNRQSPA VLLASTWLVF GLASGLTEGN AFLPRPKEHW FLIWIPLALL YALWVQKSAR DKNETAS
|
| |