| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5732 |
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| Symbol | msbA |
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| ID | 5359049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5906610 |
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| End bp | 5908421 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640814777 |
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| Product | transport protein MsbA |
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| Protein accession | YP_001351051 |
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| Protein GI | 152983980 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA GTCCTCAGAA TCCCGGACCT TCCAGTCTCA AGATCTATTT CCGCCTGTTG
GGCTACGTGA AGCCCTACAT CGGAATGTTC CTACTCAGCA TCGTCGGTTT CCTGATCTTC
GCCTCGACCC AGCCGATGCT GGCGGGCATT CTCAAGTATT TCGTCGACGG CCTGTCCAAT
CCTGACGCGG CTTTGTTTCC GAACGTGGAA TGGCCCTGGC TGCGCGACCT GCACCTGGTC
TACGCGGTGC CGCTGCTGAT CATCCTGATC GCCGCCTGGC AGGGCCTGGG TTCGTTCCTC
GGCAACTTCT TCCTGGCCAA GGTCTCCCTC GGCCTGGTGC ACGACCTGCG GGTGGCGCTG
TTCAACAAGC TATTGGTGCT GCCGAACCGC TATTTCGATA CGCACAACTC CGGCCACCTG
ATCTCGCGCA TCACCTTCAA CGTGACCATG GTCACCGGCG CCGCCACCGA GGCGATCAAG
GTAGTGATCC GCGAAGGCCT GACCGTGGTC TTCCTGTTCC TCTACCTGCT GTGGATGAAC
TGGAAGCTGA CCCTGGTGAT GCTGGCGATC CTGCCGCTGA TCGCGGTGAT GGTGACCACT
GCCAGCCGCA AGTTCCGCAA GCAGAGCAAG AAGATCCAGG TGGCGATGGG CGACGTCACC
CACGTCGCTT CGGAAACCAT CCAGGGCTAC CGCGTGGTGC GCAGCTTCGG CGGCGAGGCC
TACGAGGAAA AGCGCTTCCT CGACGCCAGC CAGAGCAACA CCGACAAGCA ATTGCGGATG
ACCAAGACCG GCGCGGTCTA CACGCCGATG CTGCAACTGG TGATCTATGT CGCCATGGCG
GTGCTGATGT TCCTGGTGCT GTGGTTGCGT GGCGATGCCT CGGCGGGCGA CCTGGTCGCC
TATATCACCG CGGCTGGCTT GCTGCCCAAG CCGATCCGCC AGCTTTCCGA GGTCAGTTCG
ACCGTGCAGC GCGGCGTCGC CGGCGCGGAA AGCATCTTCG AGCAACTGGA CGAAGTCCCC
GAGGAAGACC GGGGCACCGT GGAGAAGGAG CGGGTCGGCG GGCGCCTGGA GGTACGCAAC
CTGAGCTTCC GCTACCCGGG CACCGACAAG CAGGTGCTGG ACGACATCAG CTTCGTCGCC
GAGCCCGGGC AGATGATCGC GCTGGTCGGC CGCTCCGGTA GCGGCAAGTC GACCCTGGCG
AATCTGGTTC CGCGCTTTTA TCAGCACAAT GAGGGGCAGA TTCTCCTGGA TGGCGTCGAG
ATCGAGGATT ATCGTCTGCG CAACCTGCGT CGCCACATCG CCCTGGTGAC GCAGCAGGTC
ACCCTGTTCA ACGACAGCGT GGCCAACAAC ATCGCCTATG GCGACCTCGC CGGCGCGCCG
CGCGAGCAGA TCGAGCGGGC AGCGAAGGCG GCGAACGCCA AGGAGTTCAT CGACAACCTG
CCGCAGGGCT TCGATACCGA GGTCGGCGAG AACGGCGTGC TGCTCTCCGG CGGCCAGCGC
CAGCGCCTGG CGATCGCCCG GGCGCTGCTC AAGGACGCAC CGCTGCTGAT CCTCGACGAG
GCCACCTCGG CGCTGGACAC CGAATCGGAG CGGCACATCC AGGCGGCGCT GGACGAGGTG
ATGAAAGGAC GCACCACCCT GGTGATCGCT CACCGCCTGT CGACCATCGA GAAGGCCGAC
CTGATCCTGG TGATGGACCA GGGGCATATC GTCGAGCGTG GCAGCCACGC CGAGCTGCTG
GCGCAGAACG GCCACTATGC GCGGCTGCAC GCGATGGGAC TGGATGAGCA GGCGCCGGCG
CCTGTCGGCT GA
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| Protein sequence | MSDSPQNPGP SSLKIYFRLL GYVKPYIGMF LLSIVGFLIF ASTQPMLAGI LKYFVDGLSN
PDAALFPNVE WPWLRDLHLV YAVPLLIILI AAWQGLGSFL GNFFLAKVSL GLVHDLRVAL
FNKLLVLPNR YFDTHNSGHL ISRITFNVTM VTGAATEAIK VVIREGLTVV FLFLYLLWMN
WKLTLVMLAI LPLIAVMVTT ASRKFRKQSK KIQVAMGDVT HVASETIQGY RVVRSFGGEA
YEEKRFLDAS QSNTDKQLRM TKTGAVYTPM LQLVIYVAMA VLMFLVLWLR GDASAGDLVA
YITAAGLLPK PIRQLSEVSS TVQRGVAGAE SIFEQLDEVP EEDRGTVEKE RVGGRLEVRN
LSFRYPGTDK QVLDDISFVA EPGQMIALVG RSGSGKSTLA NLVPRFYQHN EGQILLDGVE
IEDYRLRNLR RHIALVTQQV TLFNDSVANN IAYGDLAGAP REQIERAAKA ANAKEFIDNL
PQGFDTEVGE NGVLLSGGQR QRLAIARALL KDAPLLILDE ATSALDTESE RHIQAALDEV
MKGRTTLVIA HRLSTIEKAD LILVMDQGHI VERGSHAELL AQNGHYARLH AMGLDEQAPA
PVG
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