| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5711 |
|---|
| Symbol | |
|---|
| ID | 5356330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5882161 |
|---|
| End bp | 5884251 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640814756 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351030 |
|---|
| Protein GI | 152986679 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.717082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTG AAAACCTCAA GCGCCTGCTG GCACCCAGGC ATCTCGCCTT CATCGGCGGC
CGTGGCATGG CGCGTGCCCT GAAACGCTGT GCCGAAAGCG GTTTCGCCGG CCAGTTGTGG
CTGGTCAATC CGCAGCACGC CGAACTCGAA GGCGTACCCT GCGTGGCCAG CGTCGCCGAC
CTGCCGTGCG GCCCGGACGC GGCGTTCGTC GCCACCAACC GCGAACTGAC CCTCGACGCG
GTCGCCGCGC TCGCCGCCAA AGGTGCCGGC GGGGCGATCT GCTATGCCTC CGGCTTCGCC
GAAACCGGCG AACAGGGTCT GGCCGTGCAA TGTCGGCTGC TGGCCGCCGC CGGCGAAATG
GCGCTGCTCG GCCCGAACTG CTACGGCCTG CTCGACTACC TGCACGGCGC CGCGCTATGG
CCGGTGGCAC ATGGCGGTCG GCAGGTGGAG CGGGGCGTCG CGGTGCTGAC GCAGAGCGGC
AACTTCGCCT ACAACCTGTC GATGAGCGAC CGTTCGCTGC CGGTGGCCTA TATGGCATCG
GTGGGCAACC AGGCGCAGCT GGGCATCGCC GAGCTGATGG ATGTGCTGCT CGACGAGCCG
CGGGTGACTG CCATCGGCCT GCATCTGGAA GGGCTGAAGA ACGTCCCGGG GTTCGCCCGC
GCGGCCTATA AGGCGTTGCA GAAAGGCGTG CCGGTGATCG CCCTGAAGAC CGGGGTGTCG
GAGATCGGTG CAGCCCTCGC GCTCAGCCAC ACCAGTTCCC TGGCCGGTTC CGACGCGCTC
TACGACAGCC TGTTCGAGCG CCTCGGGGTA ATCCGCGTGA GCGGCCCGGT GAGCTTCGTC
GAAACCCTCA AGGCCGCCGC CTGCGGCCAC CTGCCTGGCG GGCCGAGCCT GGTCGCGCTG
GCCTGCTCCG GCGGCGACGC CGGGTTGATC GCCGATTACG CCGAGCGCAA CGGCCTGGCA
TTGCCGTCTT TCGATGCCGG ACAGCGCGAC GAACTGGCCG GGGTGCTGCC CGACTACGCC
AACATCGCCA ACCCGCTGGA CTTCACCACC GCCATCTGGG GCGATGCCGC GGCCCTGGAG
GAAATGCTCG ACAGCGCTTT GCGCAGCCCT GCCGACGCCG CCCTGCTGGT GCTCGACTAT
CCGGGCGAGG AAACCGGCGA GCGGCCGCAG TGCGACCTGC TTCTGCAACG CTACTGCGCC
GCGCTGAAGC GCCACGGCAA GATCGGCTTC ATCGCCTCGG CGTTCCCGGA ACTGCTGCCG
GCCCGGGCCC GCGAACTGTT GCACGGCGAG GGCGTCGCTG CGCTGCAGGG CGTCGAGGAT
GGTCTCGCCG CCTGGGGACG GATCGCCCGC TACCGCCAGC GCCGTGTGGC GCTGCTGGAG
CGCGGTGAGG CGGCGTTGGT GCCGATCTGC CCAGGGCCGC TGGCGAGCGA TGGCTACCTG
CTCGACGAGT GGCAATCCAA GCAGGCGTTG AAACCCTTCG GCCTGCCGCT GCCCCAGGGG
GTGCTGAGCA CCCCCGGCCA GGCCCGCGAA GCGGCCCTCG ACCTCGGCTT CCCGCTGGTG
CTCAAGGCGG TCAGCGCCGC ACTGCCGCAC AAGACCGAGG CCGGCGGCGT GGCGCTCGGC
CTGCGCAACG AGGCGGCGTT GGAGGCGGCA TTGTTCGACA TGCGCGAAAG CCTGGCCCGG
CACGCGCCGC AACTGGTCTT CGAGCGCGTG TTGCTGGAGC GCATGGCTGG CGCGCCGCTG
GCCGAGCTGA TCGTCGGGGT CAAGCGCGAG GAGGGCTTCG GCCTGGCATT GGTGATCGGT
GCCGGCGGGA TACTCGTGGA GCTGCTGCGC GACAGTCGCA GCCTGCTCCT GCCGACCACC
GACGCGGCGA TCCGCGATGC CCTGCTGAGC CTGCGCAGCG CGCCGTTGCT CAGCGGCTTC
CGCGGTCGCC CGGCGGTATG CATGGAGTCC CTGGTGGCGG CGATCCGTGC GGTCGCCGAA
TTCGCCTGCG AACATGCCGA GCGCCTGCTG GAGCTGGACG TCAACCCGTT GCTGGCGGAT
GCCGAGGGAG CGCTGGCGGT GGATGCGTTG ATCCGGCTGG CCAATGGCTG A
|
|---|
| Protein sequence | MNRENLKRLL APRHLAFIGG RGMARALKRC AESGFAGQLW LVNPQHAELE GVPCVASVAD
LPCGPDAAFV ATNRELTLDA VAALAAKGAG GAICYASGFA ETGEQGLAVQ CRLLAAAGEM
ALLGPNCYGL LDYLHGAALW PVAHGGRQVE RGVAVLTQSG NFAYNLSMSD RSLPVAYMAS
VGNQAQLGIA ELMDVLLDEP RVTAIGLHLE GLKNVPGFAR AAYKALQKGV PVIALKTGVS
EIGAALALSH TSSLAGSDAL YDSLFERLGV IRVSGPVSFV ETLKAAACGH LPGGPSLVAL
ACSGGDAGLI ADYAERNGLA LPSFDAGQRD ELAGVLPDYA NIANPLDFTT AIWGDAAALE
EMLDSALRSP ADAALLVLDY PGEETGERPQ CDLLLQRYCA ALKRHGKIGF IASAFPELLP
ARARELLHGE GVAALQGVED GLAAWGRIAR YRQRRVALLE RGEAALVPIC PGPLASDGYL
LDEWQSKQAL KPFGLPLPQG VLSTPGQARE AALDLGFPLV LKAVSAALPH KTEAGGVALG
LRNEAALEAA LFDMRESLAR HAPQLVFERV LLERMAGAPL AELIVGVKRE EGFGLALVIG
AGGILVELLR DSRSLLLPTT DAAIRDALLS LRSAPLLSGF RGRPAVCMES LVAAIRAVAE
FACEHAERLL ELDVNPLLAD AEGALAVDAL IRLANG
|
|---|
| |