| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5686 |
|---|
| Symbol | psd |
|---|
| ID | 5354744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5851596 |
|---|
| End bp | 5852465 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640814731 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_001351005 |
|---|
| Protein GI | 152989546 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTCA AAGATCGCCT GTTCATCTGC TGCCAATACC TGCTGCCGCA CCATCTGCTG
TCCCGGTTGG TCGGCTTCGC CGCCGACTGC CGTGCGACCT GGTTCAAGGA CCGCCTGATC
GCCTGGTTCG CCCGGCGCTA CCAGGTCGAC ATGCGCGAGG CGCAGGTCGA GGACCTGCAG
GCCTATGAAC ACTTCAACGC GTTCTTCACC CGCGCCCTGA AGGACGGCGC CCGCCCGCCG
GCCCAGGAGC CCGGCGCGGT GCTCTGCCCG GCGGATGGAG CGATCAGCCA GCTCGGCCCG
ATCGAGCACG GGCGGATCTT CCAGGCCAAG GGCCACAGCT ACAGCCTGGC CGAACTGCTC
GGCGGCGATG CCGAACTGGC CGCGCCGTTC ATGGGCGGCG ACTTCGCCAC CGTCTACCTG
TCGCCGCGCG ACTACCACCG CGTGCACATG CCGCTGGCCG GCACTCTGCG CGAGATGGTC
TACGTGCCCG GGCGGCTGTT CTCGGTGAAC CGGACCACCG CGGAAAACGT CCCCGAGCTG
TTCGCCCGCA ACGAACGGGT GGTCTGCCTG TTCGACACCG AGCGCGGACC GATGGCCGTG
GTGCTGGTCG GCGCGATGAT CGTTGCCTCC ATCGAGACCG TCTGGGCCGG CCTGGTCACG
CCGCCGAAGC GCGAGCTGAA GACCTTCCGC TACGACGAGG CCGCACGCGC GCCGATCCAC
CTGGAGAAAG GCGCCGAACT GGGCCGCTTC AAGCTCGGCT CCACCGCCAT CGTCCTGTTC
GGCCCGCAAC AGGTCGCCTT CGCGCAAGGC CTCGGCGCAG CCACCCCGGT GCGCATGGGC
GAATGCCTGG CGCTGCCGAA ACAGGCCTGA
|
|---|
| Protein sequence | MSFKDRLFIC CQYLLPHHLL SRLVGFAADC RATWFKDRLI AWFARRYQVD MREAQVEDLQ
AYEHFNAFFT RALKDGARPP AQEPGAVLCP ADGAISQLGP IEHGRIFQAK GHSYSLAELL
GGDAELAAPF MGGDFATVYL SPRDYHRVHM PLAGTLREMV YVPGRLFSVN RTTAENVPEL
FARNERVVCL FDTERGPMAV VLVGAMIVAS IETVWAGLVT PPKRELKTFR YDEAARAPIH
LEKGAELGRF KLGSTAIVLF GPQQVAFAQG LGAATPVRMG ECLALPKQA
|
|---|
| |