| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5676 |
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| Symbol | amiB |
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| ID | 5353817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5840872 |
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| End bp | 5842335 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814721 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001350995 |
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| Protein GI | 152989096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.538418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCCACC CTGACCATGG GAGCATGAGA AAAACGATGG GTTGGGGCTT GCGTCTGCGG
ACGTTGTTGA CTGGGGTGAT GATTCTGCTG GCCTGTCAGG TCGGCGAGGT TCTGGCCGCC
GCGCAAATCA AGAGCGTGCG GATCTGGCGC GCTCCGGATA ACACCCGTCT GGTCTTCGAT
CTCTCCGGCC CGGTGCAGCA CAGCCTGTTC ACCCTGGCCG CGCCCAACCG TATCGTCATC
GACGTCAGCG GCGCCCAACT GGCGACCCAG CTCAACGGCC TCAAGCTCGG CAACACCCCG
ATCACCGCGG TGCGCTCGGC CCAGCGCACG CCGAACGACC TGCGCATGGT CCTCGACCTG
TCCGCCCAGG TCACCCCGAA GAGCTTCGTC CTGCCACCCA ACCAGCAGTA TGGCAACCGC
CTGGTGGTCG ATCTCTATGA CCAGGGCGCC GACCTGACCC CGGACGTGCC GGCGACACCG
ACCCCGAGCG TGCCGGTCAC CCCGGTGACA CCGACCCAAC CGGTGGCCAA GCTGCCGCTG
CCGACCAAGG GTGGCACCCG CGACATCGTC ATCGCCATCG ACGCCGGGCA CGGCGGCGAG
GACCCCGGCG CCCTCGGCCC GGGCGGCCTG CACGAGAAGA ACATCACCCT GTCGATCGCC
CGCGAGTTGC AGCGACAGAT CAACCAGGTG CGCGGCTACC GTGCCGAACT GACCCGCACC
GGCGACTACT TCATCCCGCT GCGCAAGCGC ACCGAGATCG CCCGCAAGAA GGGCGCCGAC
CTGTTCGTCT CGATCCATGC CGACGCCGCG CCGAGCCGCA GCGCCTTCGG CGCCTCGGTG
TTCGCCCTGT CCGACCGCGG CGCCACCTCG GAAACCGCGC GCTGGCTGGC CGACAGCGAA
AACCGTTCCG ACCTGATCGG CGGCGACGGC AGCGTCAGCC TCGGCGACAA GGACCAGATG
CTCGCCGGCG TGCTGCTCGA CTTGTCGATG ACCGCGACCC TGTCGTCGAG CCTGGATGTC
GGGCACAAGG TGCTGACCAA TGTCGGACGC ATCACCTCGC TGCACAAGCG GCGGGTGGAG
CAGGCCGGAT TCATGGTGCT GAAATCGCCG GACATTCCCT CGATCCTGGT GGAAACCGGC
TTCATCTCGA ACGTCAACGA GTCGCGCAAG CTGGCCAGCG CCAGTCACCA GCAGGCCCTG
GCGCGTTCGA TCACCAGCGG CATCCGCCAG TACTTCCAGC AGAGCCCGCC GCCCGGCACC
TACATCGCCT CGTTGCGCGC CCAGGGCAAG CTGTCGATGG GGCCGCGCGA GCACGTGGTG
CGGCCCGGAG AGACCCTGGC GATGATCGCC CAGCGCTATG AAGTGAGCAT GGCCGCGCTG
CGCAGCAGCA ACAGCCTGTC CAGCGACAAC CTGAAAGTCG GCCAGGCCCT GTCCATCCCG
AGCACCGCCC TGGCGGCCCA GTGA
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| Protein sequence | MCHPDHGSMR KTMGWGLRLR TLLTGVMILL ACQVGEVLAA AQIKSVRIWR APDNTRLVFD
LSGPVQHSLF TLAAPNRIVI DVSGAQLATQ LNGLKLGNTP ITAVRSAQRT PNDLRMVLDL
SAQVTPKSFV LPPNQQYGNR LVVDLYDQGA DLTPDVPATP TPSVPVTPVT PTQPVAKLPL
PTKGGTRDIV IAIDAGHGGE DPGALGPGGL HEKNITLSIA RELQRQINQV RGYRAELTRT
GDYFIPLRKR TEIARKKGAD LFVSIHADAA PSRSAFGASV FALSDRGATS ETARWLADSE
NRSDLIGGDG SVSLGDKDQM LAGVLLDLSM TATLSSSLDV GHKVLTNVGR ITSLHKRRVE
QAGFMVLKSP DIPSILVETG FISNVNESRK LASASHQQAL ARSITSGIRQ YFQQSPPPGT
YIASLRAQGK LSMGPREHVV RPGETLAMIA QRYEVSMAAL RSSNSLSSDN LKVGQALSIP
STALAAQ
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