| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5657 |
|---|
| Symbol | alr2 |
|---|
| ID | 5353855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5822207 |
|---|
| End bp | 5823283 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640814702 |
|---|
| Product | biosynthetic alanine racemase |
|---|
| Protein accession | YP_001350978 |
|---|
| Protein GI | 152989346 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCCC TCGTTGCCAC CGTCGACCTT TCCGCGATCC GCCACAACTA CAACCTGGCC
AAGCGCTGCG CGCCGCAGCG CCAGGCGTTC GCGGTGGTCA AGGCGAACGC CTATGGCCAC
GGTGCGCGTG AAGTGGTGAC GGCGCTGCAC GACGAGGCCG ACGGTTTCGC CGTGGCTTGC
CTGGAGGAGG CTGCCGAGGT CCGCGCCCTG CACGCCGACG CGCGGATCCT GCTGCTGGAA
GGCTGTTTCG AGGCGAGCGA ATACGCCCTC GCCGGCCAGT TGCGGCTGGA CCTGGTGATC
CAGGGGCTCG AGCAGGGCGA AGCGTTCCTC GCCGCCGGAC TGGATACACC GCTCAACGTC
TGGCTCAAGC TCGACTCCGG CATGCACCGC CTGGGCTTCG ACCCCGCCGC GCTGCGCGCG
TGGCATGCGC GCCTGCGCAA CCATCCCGGC GTGCGCGAGC TGAACCTGAT CAGCCACTTC
GCCTGCGCCG ACGAGCGCAA CCATCCGCTC ACCGAGCAGC AGGTGGAGTG CTTCCTCGGC
CTGCTCGACC TGGATTTCGA CCAGCGCAGC CTGGCCAATT CGGCGGCGGT GCTGACCATC
CCGGCCGCGC ACATGGACTG GCTGAGGCCG GGGATCATGC TCTACGGCGC GACCCCCTTC
GCCGACCTGA GCGCCGCCGA GCTGGGCTTG AAGCCGGCGA TGAGCCTGAC CGCGCGTCTG
ATCTCGGTGC GCGAGGTGGC GGCGGGCGAG AGCGTCGGCT ACGGCGCCGG CTGGGTCGCC
GAACGCCCGA CTCGGATCGG CACGGTCAGC TGCGGCTACG CCGACGGCTA CCCGCGCAAC
GCACCAGCCG GCACCCCGGT GCTGGTCGGC GGACGACGCA CGCGGTTGGC CGGCCGGGTA
TCGATGGACA TGCTGACGGT CGATCTCGGC GGCCTGCCGG ACGTCCGCGT CGGCGATCCG
GTGGAGCTAT GGGGCGCGCA ACTGGCGGTG GACGAGGTGG CGTGCGCCTG CGGCAGCATC
GGCTATGAGC TGCTGAGCAA GGTCACCGCG CGGGTGCCGC GGCGCTACGC CCATTGA
|
|---|
| Protein sequence | MRPLVATVDL SAIRHNYNLA KRCAPQRQAF AVVKANAYGH GAREVVTALH DEADGFAVAC
LEEAAEVRAL HADARILLLE GCFEASEYAL AGQLRLDLVI QGLEQGEAFL AAGLDTPLNV
WLKLDSGMHR LGFDPAALRA WHARLRNHPG VRELNLISHF ACADERNHPL TEQQVECFLG
LLDLDFDQRS LANSAAVLTI PAAHMDWLRP GIMLYGATPF ADLSAAELGL KPAMSLTARL
ISVREVAAGE SVGYGAGWVA ERPTRIGTVS CGYADGYPRN APAGTPVLVG GRRTRLAGRV
SMDMLTVDLG GLPDVRVGDP VELWGAQLAV DEVACACGSI GYELLSKVTA RVPRRYAH
|
|---|
| |