Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5579 |
Symbol | |
ID | 5358372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5748792 |
End bp | 5750057 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640814623 |
Product | hypothetical protein |
Protein accession | YP_001350899 |
Protein GI | 152984160 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTC GCAGTCTGCT CAAGGCCTTC ACGCTGTCCG CGTCCATCGC TTCCATGGGC CTGTCCTGGT CGATCCAGGC CGCCGAAACC ATCAAGGTCG GCATCCTCCA CTCGTTGTCC GGGACCATGG CGATCTCCGA GACCTCGCTG AAGGACATGG CCCTGATGAC CATCGACGAG ATCAACGCCA AGGGCGGGGT CAACGGCAAG AAGCTCGAAG CGGTGGTGGT CGACCCGGCG TCGAACTGGC CGCTGTTCGC CGAGAAGGCC CGCCAGTTGC TGACCCAGGA CAAGGTCGCG GTGGTCTTCG GTTGCTGGAC CTCGGTGTCA CGCAAATCCG TATTGCCGGT GTTCGAGGAA CTCAACGGGC TGCTGTTCTA CCCGGTGCAG TACGAGGGCG AGGAACTTTC GCCGAACGTC TTCTATACCG GCGCGGCGCC GAACCAGCAG GCGATCCCGG CGGTGGAGTA CCTGATGAGC GAGGACGGCG GCGGCGCCAG GCGCTTCTTC CTGCTCGGCA CCGACTATGT CTACCCACGC ACCACCAACA AGATCCTGCG CGCCTTCCTG CACAGCAAGG GCGTGGCCGA CAAGGACATC CAGGAGGTCT ACACGCCGTT CGGCCACAGC GACTACCAGA CCATCGTCGC CGACATCAAG AAGTTCGCCG CCGGCGGCAA GACCGCGGTG GTCTCCACCG TCAACGGCGA CTCCAACGTG CCGTTCTACA AGGAACTGGC CAACCAGGGC CTGGAAGCCA CCGAGGTGCC GGTGGTGGCC TTCTCCGTGG GCGAGGAAGA ACTGCGCGGC ATCGACACCA AGCCGCTGGT CGGCAACCTG GCGGCGTGGA ACTACTTCGA GTCGGTGAGC AATCCGGTCA ACGAGAAGTT CGTCGCCGAC TGGAAAGCCT ACGCCAAGGC GAAGAACCTG CCGAACTACG CCACCGCGGT GACCAACGAC CCGATGGAGG CCACCTACGT CGGCATCCAC ATGTGGGCGC AGGCGGTACA GAAGGCTGGC AGCACCGAGG TCGACAAGGT CCGCGCGGCC ATGGCCGGGC AGAGCTTCAA GGCGCCGTCG GGCTACACCC TGGTGATGGA CAAGAGCAAC CACCACCTGC ACAAGCCGGT GATGATCGGC GAGATCCAGG ACGACGGTCA GTTCGAGGTG GTCTGGAAGA CCCCCGAGCC GCTCCGCGCG CAACCCTGGA GCCCGTTCAT TCCGGGCAAC GAGAAGAAGC CGGACTACGC GGCGAAGAGC GACTGA
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Protein sequence | MKRRSLLKAF TLSASIASMG LSWSIQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE INAKGGVNGK KLEAVVVDPA SNWPLFAEKA RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE LNGLLFYPVQ YEGEELSPNV FYTGAAPNQQ AIPAVEYLMS EDGGGARRFF LLGTDYVYPR TTNKILRAFL HSKGVADKDI QEVYTPFGHS DYQTIVADIK KFAAGGKTAV VSTVNGDSNV PFYKELANQG LEATEVPVVA FSVGEEELRG IDTKPLVGNL AAWNYFESVS NPVNEKFVAD WKAYAKAKNL PNYATAVTND PMEATYVGIH MWAQAVQKAG STEVDKVRAA MAGQSFKAPS GYTLVMDKSN HHLHKPVMIG EIQDDGQFEV VWKTPEPLRA QPWSPFIPGN EKKPDYAAKS D
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