Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5561 |
Symbol | |
ID | 5355344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5726678 |
End bp | 5727214 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640814606 |
Product | hypothetical protein |
Protein accession | YP_001350882 |
Protein GI | 152986742 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.546979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGCGC CGATCAGTGC CGAGGAGGTG GCCCACCGGG CCGCCTCCGA CGCCGAACTC ATCGCCTGGG TCGACGAGCA GGACCGCCCG CTCGGCAGCC TGCCGCGCGC CGAACTGCGC ACGCGCGGAC TGATCGGCCG CGGCACCTTC ATCCTGCTGT TCAACTCCGC CGGCGAGCTG TGCGTGCAGC GCCGGACCCT GAGCAAGGCG GTCTATCCCG GCCACTGGGA TCTCGCCGCC GGCGGCATGG TGCAGGCCGG CGAGGCCTAC GCAGAGTCCG CCGCGCGCGA ACTGGAGGAA GAACTGGGCA TCCGCGACGT GCCCCTGCGC GAGCACGGCC GCTTCCTCTT CGACGAACCG GGCAACCGCC TCTGGTGCGT GGTCTATTCC GCGGTTTCCG ACGCACCCTT GCGCCTGCAA CCCGAGGAAA TCTCCGAAGC CCGTTTCATC CGCCCCGAAC GGGCGCTGGA AGAGGCGCGC AGCCTGCCGT ACTGCCCCGA CTCCCTGCGC GCGTTGCGCC TGTACCTGGA TGCCTGA
|
Protein sequence | MAAPISAEEV AHRAASDAEL IAWVDEQDRP LGSLPRAELR TRGLIGRGTF ILLFNSAGEL CVQRRTLSKA VYPGHWDLAA GGMVQAGEAY AESAARELEE ELGIRDVPLR EHGRFLFDEP GNRLWCVVYS AVSDAPLRLQ PEEISEARFI RPERALEEAR SLPYCPDSLR ALRLYLDA
|
| |