Gene PSPA7_5559 details

Gene Information

• Locus tag: PSPA7_5559
• Symbol: speA
• ID: 5355218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5723943
• End bp: 5725853
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640814604
• Product: arginine decarboxylase
• Protein accession: YP_001350880
• Protein GI: 152988604
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGCCC GACGGACTCG CAAAGACGAT GGCAGCAACT GGACCGTGGC CGACAGCCGC 
GGCGTATACG GCATCCGCCA CTGGGGGGCG GGTTATTTCG CCATCAACGA TGGCGGCAAC 
GTCGAAGTGC GTCCGCAGGG GGCCGATTCG ACGCCCATCG ATCTCTACGA GCTGGTCGGC 
CAGTTGCGCG AGGCGGGCCT GAGCCTGCCG CTGCTGGTGC GCTTCCCGGA TATCCTGCAG 
GACCGCGTGC GCAAGCTCAC CGGCGCCTTC GACGCGAACA TCCAGCGCCT GGAGTACCAG 
AGCCGCTACA CCGCGCTGTA TCCGATCAAG GTCAACCAGC AGGAAGCGGT GGTGGAGAAC 
ATCATCGCCA CCGAGAACGT CTCCATCGGC CTGGAAGCCG GTTCCAAGCC GGAGCTGATG 
GCGGTACTGG CGCTGGCGCC GAAGGGCGGC ACCATCGTCT GCAACGGCTA CAAGGACCGC 
GAGTTCATCA GGCTGGCGCT GATGGGGCAG AAGCTCGGGC ACAACGTGTT CATCGTGATC 
GAGAAGGAGT CCGAGGTGCA GCTGGTGATC GAGGAGGCCG CCACCGTCGG CGTGCAGCCC 
CAGGTCGGCC TGCGCGTGCG GCTGTCCTCG CTGGCTTCGT CGAAGTGGGC CGATACCGGT 
GGCGAGAAGG CCAAGTTCGG CCTCTCCGCC GCGCAATTGC TGTCGGTGGT CGAGCGCTTC 
CGCAAGGCCG GTCTCGACCA GGGCGTGCGC CTGCTGCACT TCCACATGGG CTCGCAGATC 
GCCAACCTGG CCGACTACCA GCACGGCTTC AAGGAAGCCA TCCGCTATTA TGGCGAGCTG 
CGCGCGCTCG GCCTGCCGGT CGACCACATC GATGTCGGCG GCGGCCTCGG CGTGGACTAC 
GACGGCACCC ACTCGCGCAA TGCCAGTTCG ATCAACTACG ACATCGACGA CTATGCCGGC 
GTGGTGGTGG GCATGCTCAA GGAGTTCTGC GATGCCCAGG GCCTGCCGCA TCCGCACATC 
TTCTCCGAGA GTGGCCGCGC GCTGACCGCG CACCACGCGG TGCTGATCAC CCAGGTTACC 
GACGTCGAGC GGCATATCGA CGATGTGCCG AAGATCGCCG GGCTCGACGA GCAGCCGGAG 
ATCGTCCGCT GGCTGGCCGA ACTGCTCGGC CCGACCGATG CCGAGATGGT CACCGAGACC 
TACTGGCGCG CCACACACTA CATCGGCGAC GCCGCCGCGC AGTATGCCGA CGGCAAGATC 
AGCCTGGCCC AGAAGGCGCT CGCCGAGCAG TGCTACTTCG CTATCTGCCG GCGCCTGCAT 
AACCAGCTCA AGGCCCGCCA GCGCTCCCAC CGGCAGGTGC TCGACGAACT CAACGACAAG 
CTCGCCGACA AGTACATCTG CAACTTCTCG GTATTCCAGA GCCTGCCGGA CACCTGGGCC 
ATCGGCCAGG TGCTGCCGAT CCTGCCCCTG CATCGTCTGG GCGAGGAGCC GGATCGGCGC 
GCGGTACTGC AGGACCTGAC CTGCGACTCC GACGGCAAGA TCACCCAGTA CGTCGACGAG 
CAGAGCATCG AGACCAGCCT GCCGGTGCAC GAGGTGAAGG AGGGCGAGGA CTACCTGATC 
GGGGTGTTCC TGGTCGGCGC CTACCAGGAG ATCCTCGGCG ACATGCACAA CCTGTTCGGC 
GACACCGACT CGGTGAACGT CTACCAGCGC GCCGACGGCG GCGTCTACCA CGCCGGCATC 
GAGACCCACG ACACCATCGA GGACATGCTG CGTTACGTGC ACCTGTCACC GGAGGAGCTG 
ATGACCCTCT ATCGCGACAA GGTCGCCGGG GCCAAGCTCA CCGCCCGCGA GCGCAACCAG 
TACCTGGATG CGTTGCGCCT CGGGCTTACC CGTTCGGCCT ACCTGTCCTG A 

 

Protein sequence

MAARRTRKDD GSNWTVADSR GVYGIRHWGA GYFAINDGGN VEVRPQGADS TPIDLYELVG 
QLREAGLSLP LLVRFPDILQ DRVRKLTGAF DANIQRLEYQ SRYTALYPIK VNQQEAVVEN 
IIATENVSIG LEAGSKPELM AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI 
EKESEVQLVI EEAATVGVQP QVGLRVRLSS LASSKWADTG GEKAKFGLSA AQLLSVVERF 
RKAGLDQGVR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RALGLPVDHI DVGGGLGVDY 
DGTHSRNASS INYDIDDYAG VVVGMLKEFC DAQGLPHPHI FSESGRALTA HHAVLITQVT 
DVERHIDDVP KIAGLDEQPE IVRWLAELLG PTDAEMVTET YWRATHYIGD AAAQYADGKI 
SLAQKALAEQ CYFAICRRLH NQLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA 
IGQVLPILPL HRLGEEPDRR AVLQDLTCDS DGKITQYVDE QSIETSLPVH EVKEGEDYLI 
GVFLVGAYQE ILGDMHNLFG DTDSVNVYQR ADGGVYHAGI ETHDTIEDML RYVHLSPEEL 
MTLYRDKVAG AKLTARERNQ YLDALRLGLT RSAYLS