| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5540 |
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| Symbol | |
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| ID | 5358062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5704299 |
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| End bp | 5705660 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640814585 |
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| Product | putative transporter |
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| Protein accession | YP_001350861 |
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| Protein GI | 152985827 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.360996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT TGCGCGACGC CTGGCGGCAC GCCCCCACCC ACCACAAGGT CTGGGCGCTG
GCCGGGCCGA TGATCCTGTC GAACGTTTCC GTCCCCCTGG TGCACCTGGT GGACAGCACG
GTGGTCGGCC ACCTGCCGCA CGCCTACCAG CTCGGCGCGG TAGCCGTGGG CGGCAGCCTG
TATACCCTGA TGGTCGGCGT GCTCGGCTTC CTGCGCATGG GTACCACCGG TTTCGCCGCC
CAGGCCGCCG GCCGCGACGA CGGCGGGGCG CTGCGCCTGA TCCTCGCCCA GGGCCTGGGC
ATGGCGCTGC TCCTGGCCCT GCTGCTCGGC GCGCTGGCGC TGCCGCTGAG CGGCTGGGCG
CTGCAACTGA TGCAGCCTTC CGCCGAGCTG ACCGGCGAGG CCCGGGCCTT CTTCCATACC
CGCCTGCTCG GCCTGCCGGC GGCGCTGGCC AGCTACGCGC TGGTCGGCTG GTTCCTCGGC
ACGCAGAACG CGCGGGCGCC GCTGGCGATC CTGCTGGGCA CCAACCTGAC CAACATCGTG
CTGGTGCTCT GGTTCGTCCA TGGCCTCGAC TGGGGCGTGC AGGGCGCGGC GCGCGCCTCG
GTACTGGCGG AATGGAGCGG CGCCCTGCTC GGCCTGGCCC TGGCCCGCCG CGACCTGGCC
CGCCGTCCCG GACAGGCGCA GTGGCAACGG CTGCGCCACT GGTTGTCCTG GCTGCCGCTG
CTGATGGTCA ATCGCGATAT CTTCATCCGC AGCCTGGCCC TGCAACTGGT GTTCTTCCTC
CTCACCGTGC AGGGCGCCCG GCTCGGCGAT GCCACGGTGG CGGCCAACGC CCTGCTGCTC
AATGGCCTGC TGCTCACCTC CTACGCCCTC GACGGACTCG CCCATGCGGT GGAGGCACTG
TGCGGCCACG CCATCGGCGC GCGCGACCGC GCCGCCCTGC GCCGCGCGCT GGTGGTGGCC
GGCGGCTGGT CGCTGCTGGC GAGCCTGGCC TTCGCCGCCC TGTTCGCCCT GTTCGGCCAC
CTGTTCGTCG ACCTGCAGAG CGACATCGCC GGGGTCCGCC AGGTCGCCTA CGCCTACCTG
CCGTACCTGG CCTGCCTGCC GCTGCTGGGG ATGTGGAGCT ACCTGCTCGA CGGCCTGTTC
ATCGGCGCCA CCCGCGCCCA CGAGATGCGC AACGCGATGC TCGTCGCGGT GGCCGCCAGC
CTGCCGCTCG GCTGGCTGCT ACAAGGGCTG GGCAACCACG GCCTGTGGCT GGCGTTTCTC
ACCTTCATGC TGCTGCGCGG GCTGGTCCTG GCCGCCTACG GCTGGCGCCT GACCCGCCGC
GACGGCTGGT TCGCCGCCCA GCGCGCCGGC AGCGGACTGT AG
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| Protein sequence | MSLLRDAWRH APTHHKVWAL AGPMILSNVS VPLVHLVDST VVGHLPHAYQ LGAVAVGGSL
YTLMVGVLGF LRMGTTGFAA QAAGRDDGGA LRLILAQGLG MALLLALLLG ALALPLSGWA
LQLMQPSAEL TGEARAFFHT RLLGLPAALA SYALVGWFLG TQNARAPLAI LLGTNLTNIV
LVLWFVHGLD WGVQGAARAS VLAEWSGALL GLALARRDLA RRPGQAQWQR LRHWLSWLPL
LMVNRDIFIR SLALQLVFFL LTVQGARLGD ATVAANALLL NGLLLTSYAL DGLAHAVEAL
CGHAIGARDR AALRRALVVA GGWSLLASLA FAALFALFGH LFVDLQSDIA GVRQVAYAYL
PYLACLPLLG MWSYLLDGLF IGATRAHEMR NAMLVAVAAS LPLGWLLQGL GNHGLWLAFL
TFMLLRGLVL AAYGWRLTRR DGWFAAQRAG SGL
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