Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5489 |
Symbol | |
ID | 5353683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5656346 |
End bp | 5657119 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640814534 |
Product | putative transcriptional regulator |
Protein accession | YP_001350811 |
Protein GI | 152984489 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTTG GTCAGGTCAG GCAGCGCCGT CTGTCGGATG ACATCGTGGC GCAGCTCGAG GCGATGATCC TGGAGGGCAC GCTGAAGTCC GGCGAGCGGC TGCCGGCCGA GCGCGTGCTC GCCGAGCAGT TCGGGGTTTC CCGTCCGTCG CTGCGCGAGG CGATCCAGAA GCTGGTGGCA AAGGGGCTGC TGGTCAGCCG CCAGGGTGGT GGCAACTATG TGACCGAGTC GCTGGGCGCG ACTTTCAGCG ACCCGTTGCT GCACCTGCTG GAGGGCAATC CGGATGCCCA GCGCGACCTG CTGGAGTTCC GCCACACCCT GGAGGGATCC TGCGCCTACT ACGCGGCGTT GCGCGCCACC TCCCTGGATC ACCAGCGTCT CACCGAGGCC TTCGAGGCAT TGCAGGAATG CTATGCGCGC AACGACCAGG TCAGCGCGGA AGAGGGCGCC GCCGACGCGC GCTTCCACCT GGCGATCGCC GAGGCCAGCC ACAACACAGT GCTGCTGCAC ACCATCAAGG GCCTGTTCGA CCTGCTGCGG CGCAACGTGG TGACCAATAT CGGCGGGATG TACGCGCAGC GCACGGAAAC CCGCGCGCAG CTGATGGAGC AGCATCAGCG CCTGTACGAC GCGATCGTCA GCGGTCAGGC GGAGCTGGCC CGGGAAGTGT CCAACCAGCA CATCCACTAT GTGCAGGAGG TCCTGGCGGA GGTCCAGGAA GAGGCGCGCA GGATGAAGCG CTCGCAGCGC CGGCGCAGCG TGCAGGAAGA CTAG
|
Protein sequence | MEFGQVRQRR LSDDIVAQLE AMILEGTLKS GERLPAERVL AEQFGVSRPS LREAIQKLVA KGLLVSRQGG GNYVTESLGA TFSDPLLHLL EGNPDAQRDL LEFRHTLEGS CAYYAALRAT SLDHQRLTEA FEALQECYAR NDQVSAEEGA ADARFHLAIA EASHNTVLLH TIKGLFDLLR RNVVTNIGGM YAQRTETRAQ LMEQHQRLYD AIVSGQAELA REVSNQHIHY VQEVLAEVQE EARRMKRSQR RRSVQED
|
| |