Gene PSPA7_5442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5442 
Symbol 
ID5359182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp5606088 
End bp5609039 
Gene Length2952 bp 
Protein Length983 aa 
Translation table11 
GC content67% 
IMG OID640814487 
Producttwo-component sensor CbrA 
Protein accessionYP_001350766 
Protein GI152986727 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGA GCTTTAGCCT CACCCAGCTG ATCCTGATCA GCGTCGCCTA TCTCTTCACC 
CTGTTCGGCA TCGCCTGGAT CGCCGAGCGC GGCTACGTGC CGCGCCGGCT GGTGCGCCAC
CCGCTGGTCT ACACCCTGTC GCTGGGGGTC TATGCCAGCG CCTGGGCCTT CTACGGCACG
GTCGGCCTGG CCTACCAGTA CGGCTACGGC TTCCTGGCCA TCTACCTGGG GATCTCCGGG
GCCTTCCTGC TCGCCCCGGT GTTGCTATAC CCGATCCTGC GGGTGACCCG CGCCTACCAG
TTGTCCTCGC TGGCCGACCT GTTCGCCTTC CGCTTCCGCA GCACCTGGGC CGGTGCCCTG
ACCACCCTGT TCATGCTGAT CGGCGTGCTG CCGATGCTGG CCCTGCAGAT CCAGGCGGTC
GCCGACTCGA TCAGCATCCT CACCCGAGAC CCGGCCCAGG AGCGGGTCGC GTTCGTCTTC
TGCACCCTGA TCACCCTGTT CGCGATCCTC TTCGGCGCCC GCCACATCGC CACCCGCGAG
CGCCACGAGG GGCTGGTGTT CGCCATCGCC TTCGAATCGC TGGTCAAGCT GGTGATGCTC
GGCAGCATCG GCCTCTACGC CCTGTACGGG GTCTTCGGCG GGCCGGAAGG CCTGGAAATC
TGGCTGTTGC AGAACCAGAC CGCGCTGACC ACCCTGCACA CCCCCCTGGC CGAGGGGCCG
TGGCGGACGT TGCTGCTGGT GTTCTTCGCC GCGGCCATCG TGATGCCGCA CATGTATCAC
ATGATCTTCA CCGAGAACCT CAACCCGCGG GCGCTGATCT CCGCCAGTTG GGGCCTGCCA
CTGTTCCTCC TGCTGATGAG CCTGGCCGTG CCGCCGATCC TCTGGGCCGG CCTGCGCCTC
GGCGCCTCGA CCACCCCGGA GTACTACACC ATCGGCCTCG GCCTGGCGGT GGACAGCCCG
GCCCTGGCCC TGGCCGCCTT CGTCGGCGGG ATCTCCGCCG CCAGCGGGCT GACCATCGTG
ATGACCCTGG CGCTATCGGG CATGGTCCTC AACCACCTGG TGCTGCCGCT CTACCAGCCA
CCGGCGCAGG GCAACATCTA CCGCTGGCTG AAGTGGACCC GGCGCCTGCT GATCGTCGCC
ATCATCATGG CCAGCTATGC CTTCTACCTG CTGCTGGGCG CCGAGCAGGA CCTGTCCAAC
CTCGGCATAG TGTCCTTCGT CGCCACCCTG CAGTTCCTCC CCGGCGCCCT CTCGGTGCTG
TACTGGCCGA CCGCCAACCG CCGCGGCTTC ATCGCCGGGC TGATCGCCGG GATGCTGGTC
TGGGCGATCA CCATGCTGCT GCCGCTGATG GGCAACGTGC AGGGCCTGTA CCTGCCGCTG
TTCGACATGA TCTACGTGCT GGACGACTCC AACTGGCACC TGGCGGCGCT GTCCTCGCTG
GCGGCCAACG TCCTGGTCTT CACCCTGGTC TCGCTGTTCA CCGAAGCCAG CGACGAAGAG
AAAGGCGCGG CCGAGGCCTG CGCGGTGGAC AATGTGCGCC GTCCGCAGCG CCGCGAGCTG
TTCGCCGGCT CGCCGCAGGA GTTCGCCAGC CAGCTGGCCA AGCCGCTGGG CGCGAAGACC
GCGCAGAAGG AAGTCGAGCA GGCCCTGCGC GACCTCCACC TGCCCTTCGA CGAACGCCGC
CCCTACGCCC TGCGCCGCCT GCGCGACCGC ATCGAGGCCA ACCTGTCCGG GCTGATGGGG
CCGAGCGTGG CCCAGGACAT CGTGGAAACC TTCCTGCCCT ACAAGACCAG CGAGGAAAGC
TACGTCACCG AGGACATCCA CTTCATCGAG AGCCGCCTGG AGGATTACCA CTCGCGGTTG
ACCGGTCTCG CCGCCGAACT CGACACCCTC CGCCGCTACC ACCGGCAGAC CCTGCAGGAC
CTGCCGATGG GCGTCTGCTC GCTGGCCAAG GACCAGGAAG TGCTGATGTG GAACCGCGCC
ATCGAGGAAC TCACCGGGGT CGGCGCGCAG AAGGTCGTCG GCTCGCGCCT GTCGGCCCTG
CCGGAACCCT GGAAGGGCCT GCTGGAACGC TTCATCGACG CTCCCGACGA GCATCTGCAC
AAGCAGCGCC TGGTCTACGA CGGCCACACC CGCTGGCTGA ACCTGCACAA GGCGGCGATC
GAGGAGCCCC TGGCGCCGGG CAACAGCGGC CTGGTGCTGC TGGTCGAGGA CCTCACCGAA
ACCCAGTTGC TGGAAGACAA GCTGGTCCAC TCCGAGCGCC TGGCATCCAT TGGCCGCCTG
GCCGCCGGCG TCGCCCACGA GATCGGCAAC CCGATCACCG GCATCGCCTG CCTGGCGCAG
AATCTACGCG AGGAGCGCGA GGGCGACGGC GAACTGACCG AAATCAGCGA ACAGATCCTC
GACCAGACCA AGCGCGTCTC GAGGATCGTC CAGTCGCTGA TGAGCTTCGC CCATTCCGGC
AGTCACCTGC AGGCCCTGGA GCCGGTATGC CTGAGCGAGG TCGCCCAGGA GGCCATCGGC
CTGCTGTCGC TGAACCGGCG CAGCGTCGAG GTGCAGTTCT TCAACCTGTG CGATCCGGCG
CACTGGGTCG AGGGCGACTC TCAGCGCCTG GCCCAGGTGC TCATCAATCT GCTCTCCAAC
GCCCGCGACG CCAGTCCGCC GGGCGGGGCG ATCCGGGTCC GCAGCGAAGC CTCCGAACAC
ACCGTGGACC TGATCGTCGA GGACGAAGGC AGCGGCATCC CGAAAGCGAT CATGGACCAG
CTGTTCGAGC CGTTCTTCAC CACCAAGGAC CCCGGCAAGG GCACCGGGCT CGGCCTCGCA
CTGGTCTATT CGATCGTGGA AGAGCATTAT GGACAGATAA CCATCGAGAG CCCGACGGAT
CACTCGCGAG AAGGCGGCAC CCGCTTCCGC GTGACCCTGC CGCGGCACCC TGGCCCGACG
GCCGAGCTGT AG
 
Protein sequence
MLTSFSLTQL ILISVAYLFT LFGIAWIAER GYVPRRLVRH PLVYTLSLGV YASAWAFYGT 
VGLAYQYGYG FLAIYLGISG AFLLAPVLLY PILRVTRAYQ LSSLADLFAF RFRSTWAGAL
TTLFMLIGVL PMLALQIQAV ADSISILTRD PAQERVAFVF CTLITLFAIL FGARHIATRE
RHEGLVFAIA FESLVKLVML GSIGLYALYG VFGGPEGLEI WLLQNQTALT TLHTPLAEGP
WRTLLLVFFA AAIVMPHMYH MIFTENLNPR ALISASWGLP LFLLLMSLAV PPILWAGLRL
GASTTPEYYT IGLGLAVDSP ALALAAFVGG ISAASGLTIV MTLALSGMVL NHLVLPLYQP
PAQGNIYRWL KWTRRLLIVA IIMASYAFYL LLGAEQDLSN LGIVSFVATL QFLPGALSVL
YWPTANRRGF IAGLIAGMLV WAITMLLPLM GNVQGLYLPL FDMIYVLDDS NWHLAALSSL
AANVLVFTLV SLFTEASDEE KGAAEACAVD NVRRPQRREL FAGSPQEFAS QLAKPLGAKT
AQKEVEQALR DLHLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDIVET FLPYKTSEES
YVTEDIHFIE SRLEDYHSRL TGLAAELDTL RRYHRQTLQD LPMGVCSLAK DQEVLMWNRA
IEELTGVGAQ KVVGSRLSAL PEPWKGLLER FIDAPDEHLH KQRLVYDGHT RWLNLHKAAI
EEPLAPGNSG LVLLVEDLTE TQLLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
NLREEREGDG ELTEISEQIL DQTKRVSRIV QSLMSFAHSG SHLQALEPVC LSEVAQEAIG
LLSLNRRSVE VQFFNLCDPA HWVEGDSQRL AQVLINLLSN ARDASPPGGA IRVRSEASEH
TVDLIVEDEG SGIPKAIMDQ LFEPFFTTKD PGKGTGLGLA LVYSIVEEHY GQITIESPTD
HSREGGTRFR VTLPRHPGPT AEL