| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5434 |
|---|
| Symbol | |
|---|
| ID | 5358029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5599100 |
|---|
| End bp | 5599576 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640814479 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350758 |
|---|
| Protein GI | 152988955 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0342] Preprotein translocase subunit SecD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.452017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT CGACACTCGC ATTCCTTCCG CTGGGCCTGG TGCTGCTGCT GGCCGCCTGC
GCCAGCGATC CGTTGCCGAT CCCACAGCAC AGCTTCGGGG TCTACGCCAC CGCCAGCAAG
CCTTCCGCGG CGTTCCGCAC CCTGGCCGAC CCTCAGGGCA AGGCGTTGCT GGTGGCGGTC
AAGCCGAGCC TGACCCAGGC CGATGTGTTG CGCGCCGAAG TCCTCTACGA CCAGAACGGC
CGCCCCGGTG TCGAGGTCAC CTTCACCGAA CAGGCTGCCC GTCGCCTGGC CGCGCTGACC
GAGGAGGCCC AGGGGCGCGC GCTGGCGGTG CTGGTGGACG GGCGCCTGCG CCTGGCGCCG
CGGGTGCGCG AGCCGATCCG CAACGGCAAG GTCTATCTCG GCGGGCTGGG CTCGGCGTAC
GAGGCCGGCG AGCTGGCCGA CCAGTTGAAC GCGCTGAGAA ACCAGCCGGG GCGGTGA
|
|---|
| Protein sequence | MKRSTLAFLP LGLVLLLAAC ASDPLPIPQH SFGVYATASK PSAAFRTLAD PQGKALLVAV
KPSLTQADVL RAEVLYDQNG RPGVEVTFTE QAARRLAALT EEAQGRALAV LVDGRLRLAP
RVREPIRNGK VYLGGLGSAY EAGELADQLN ALRNQPGR
|
|---|
| |