Gene PSPA7_5332 details

Gene Information

• Locus tag: PSPA7_5332
• ID: 5353922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5491533
• End bp: 5493596
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640814378
• Product: Sea12
• Protein accession: YP_001350663
• Protein GI: 152989415
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1061] DNA or RNA helicases of superfamily II

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAA TTTTCAAGAA TGCCGTTCCA TCCGTCTCGG TTTCTTATGC CCGCAACGGA 
AGTTCATCAA AAGCAAACGC GCTCGGTATG CGCCCGATGC AGGAGCGCGC ATATGAGCGA 
CGCGGTGAGC AGTATTTGCT CATCAAGTCG CCGCCAGCCT CGGGCAAGAG CCGGGCGTTG 
ATGTTCATTG CTCTCGATAA GCTCCACAAC CAAGGGTTGA GGCAGGCGAT CATCGTTGTG 
CCGGAAAAGT CCATTGGTTC CAGTTTTTGC GATGAACCTC TGAGTAAGTT CGGCTTCTGG 
ACCGATTGGT GCGTGGAGCC GAAATGGAAC CTGTGCAATG CGCCCGGCTC GGACAACGGC 
GGCAAGGTCA AGTCACTTGG CGCATTCCTT GAGAGCAATG ACCAAGTATT GGTCTGCACC 
CATGCCACAT TCCGCTTCGC GGTCGATCAG TTTGGGGTGG AGGCGTTCGA CGGGCGGCTA 
ATTGCGGTGG ATGAGTTCCA TCATGTTTCC GCCAACCCGG ACAACAAGCT TGGCTTGCAT 
CTTGGGCAAT TTATCGCTCG CGACCGGGTG CACATCATCG CGATGACCGG TTCGTACTTT 
CGGGGTGACG CCGAGGCCGT GCTGGCACCA CAGGACGAGT CGAAGTTCGA TACCGTCACC 
TATACCTACT ATGAGCAACT CAATGGCTAC GAGTACCTGA AGCAGCTCGA CATCGGCTAC 
TTCTTCTACT CGGGCTCCTA CGCCGATGAC ATCCTCAAGG TGCTCGACCC AGCCGAGAAA 
ACCATCATCC ACATCCCGAA CGTCAACTCT CGCGAAAGCA CGAAGGACAA GATCAGGGAG 
GTCGAGCACA TCATCGAGGA ACTGGGTGAA TGGCAAGGGA CCGATCCAGC GACTGGCTTC 
CAATTGGTCA TGACCCCTAA TGGGCGGCTT CTTCGGATCG CTGACCTGGT GGATGACGAC 
TCAGCCAAGC GCGACGTGGT GGCCGCTGCG TTGAAAGACC CGGCACAGAA GAACAACCGC 
GATCACGTAG ACATCATCGT CGCCCTCGGC ATGGCGAAAG AAGGCTTCGA CTGGATTTGG 
TGCGAACACG CGCTGACAGT TGGCTATCGG TCCAGCCTCA CTGAAATCGT GCAGATCATC 
GGTCGCGCGA CCCGCGATGC GCCGGGTAAG ACTCGCGCCC GCTTTACCAA TCTGATCGCC 
GAGCCCGACG CTTCGGAGCA GGCCGTAACC GAAGCGGTGA ACGATACGCT TAAGGCCATC 
GCCGCTAGCT TACTCATGGA GCAGGTGCTT GCGCCTCGCT TCGAGTTCAA GCCGAAACAT 
CCGACCAACG AGCCCGCACC GGGGTTCGAC TATGGCGACG GGGGATATGA CCCGGACAAG 
TGTAATGTGG GCTTCAATCA CGACACCGGG CAGTTCCAGA TCGAGATCAA GGGACTGTCC 
GAGCCCAAGA GCGACGAAGC TGCCCGCATC TGTCGGGAAG ACCTGAACGA AGTTATTGCA 
ACCTTCGTTC AAGACAAGAC CACCATTGAG CGCGGCCTGT TTGATGAAGA GCTGGTCCCG 
GAGGAGCTGA CTCAGGTTCG GATGGGCAAG ATCATCAAGG AGAGGTATCC GGACCTTGAT 
GAAGAGGATC AGGAAGCAGT GCGTCAACAT GCTATCGCCG CCCTCAACCT GACGCAGCAG 
GCCAAGCAAC TTGCACTTGG TGGCCAAGGC AATGGCGAGC CTGCCGTCAA CACAGCCCTC 
ATTGATGGGG TGCGCAAGTT TGCGATGGAC GTGCGGGAGT TGGACATCGA CCTTATCGAC 
CGCATTAATC CGTTCAGCGA AGCCTACGCG ATTCTCGCCA AAACGATGAG CGAGGAGAGC 
CTGAAACAGG TCGCAGCAGC GATTGCGGCC AAACGCACCG GATTGACGCC CGACGAGGCA 
AAGGAACTCG CTGTCCGGGC AGTCAAGTTC AAAAAAGAGC GTGGCCGTTT GCCGTCGATC 
AGTTCAACTG ACGCCTGGGA GAAGCGAATG GCTGAAGGGG CCGCCGCCTT CGTTCGATTC 
AAAGACGAGG GGCGCTATGA TTGA 

 

Protein sequence

MTEIFKNAVP SVSVSYARNG SSSKANALGM RPMQERAYER RGEQYLLIKS PPASGKSRAL 
MFIALDKLHN QGLRQAIIVV PEKSIGSSFC DEPLSKFGFW TDWCVEPKWN LCNAPGSDNG 
GKVKSLGAFL ESNDQVLVCT HATFRFAVDQ FGVEAFDGRL IAVDEFHHVS ANPDNKLGLH 
LGQFIARDRV HIIAMTGSYF RGDAEAVLAP QDESKFDTVT YTYYEQLNGY EYLKQLDIGY 
FFYSGSYADD ILKVLDPAEK TIIHIPNVNS RESTKDKIRE VEHIIEELGE WQGTDPATGF 
QLVMTPNGRL LRIADLVDDD SAKRDVVAAA LKDPAQKNNR DHVDIIVALG MAKEGFDWIW 
CEHALTVGYR SSLTEIVQII GRATRDAPGK TRARFTNLIA EPDASEQAVT EAVNDTLKAI 
AASLLMEQVL APRFEFKPKH PTNEPAPGFD YGDGGYDPDK CNVGFNHDTG QFQIEIKGLS 
EPKSDEAARI CREDLNEVIA TFVQDKTTIE RGLFDEELVP EELTQVRMGK IIKERYPDLD 
EEDQEAVRQH AIAALNLTQQ AKQLALGGQG NGEPAVNTAL IDGVRKFAMD VRELDIDLID 
RINPFSEAYA ILAKTMSEES LKQVAAAIAA KRTGLTPDEA KELAVRAVKF KKERGRLPSI 
SSTDAWEKRM AEGAAAFVRF KDEGRYD