Gene PSPA7_5322 details

Gene Information

• Locus tag: PSPA7_5322
• Symbol: pth
• ID: 5358309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5480621
• End bp: 5481205
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640814368
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_001350653
• Protein GI: 152987749
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.380222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGCCG TACAACTGAT CGTTGGCCTG GGAAACCCGG GTCCTGAATA CGACCAGACC 
CGGCATAACG CGGGGGCCCT TTTCGTTGAG CGCCTGGCGC ATGCCCAGGG CATCAGCCTC 
GTGGCTGAGC GCAAGTATTT CGGCCTGGTC GGCAAGTTCA GCCACCAGGG CAAGGACGTT 
CGTCTGCTGA TCCCGACCAC CTACATGAAC CGCAGCGGCC AGTCCGTGGC GGCGCTGGCG 
GGTTTCTTCC GGATCCCCCC GGACGCCATC CTGGTGGCCC ACGACGAACT CGACATGCCC 
CCCGGCGTCG CCAAGCTCAA GACCGGCGGC GGCCACGGCG GGCACAACGG GTTGCGCGAC 
ATCATCGCCC AGCTCGGCAA CCAGAATTCT TTCCATCGCC TGCGGCTTGG CATCGGCCAT 
CCGGGGCACA GCAGCCTGGT GTCCGGTTAC GTGCTCGGCC GCGCCCCGCG CAGCGAGCAG 
GAACTGCTCG ACACCAGCAT CGACTTCGCC CTCGGCGTGC TGCCGGAAAT GCTCGCCGGG 
GACTGGACCC GGGCGATGCA GAAGCTGCAC AGCCAGAAGG CCTGA 

 

Protein sequence

MTAVQLIVGL GNPGPEYDQT RHNAGALFVE RLAHAQGISL VAERKYFGLV GKFSHQGKDV 
RLLIPTTYMN RSGQSVAALA GFFRIPPDAI LVAHDELDMP PGVAKLKTGG GHGGHNGLRD 
IIAQLGNQNS FHRLRLGIGH PGHSSLVSGY VLGRAPRSEQ ELLDTSIDFA LGVLPEMLAG 
DWTRAMQKLH SQKA