| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5316 |
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| Symbol | |
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| ID | 5354666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5475540 |
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| End bp | 5477267 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640814362 |
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| Product | hypothetical protein |
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| Protein accession | YP_001350648 |
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| Protein GI | 152988578 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02996] repeat-companion domain TIGR02996 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.348635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAT CCCTTGCGCT GCTGACCGTC ACGCTGCTGC TCGGCGGCTG CCAGTCACTT
ACCCACAAGA CCCCCGATGG CACCCCGCCG GTGGAAGACA CCGCGGCCGA GACCCAGGCC
AAGCCGGAGA AGTATGGCTC CTTCAGCGAG GACAGCCTGT ATTCGCTGCT GGTGGCCGAA
CTGGCCGGGC AGCGCAACCG CTTCGACATC GCCCTGAGCA ATTACGTGGT TCAGGCGCAG
AAGACCCGCG ATCCCGGGGT TTCCGAGCGA GCCTTCCGCA TCGCCGAATA CCTCGGCGCC
GATCAGGAAG CCCTCGACAC CTCGCTGCTC TGGGCGCGCA GCGCGCCGGA CAACCTCGAC
GCCCAGCGCG CCGCCGCGAT CCAGTTGGCC CGCGCCGGGC GCTACGAGGA ATCCATGGTG
TACATGGAAA AGGTCCTCAA CGGCCAGGGC GACACGCACT TCGATTTCCT CGCCCTCTCG
GCCGCGGAAA CCGACCCGGA CACCCGCGCC GGCCTGTTGC AGAGCTTCGA CCACCTGCTG
AAGAAGTACC CGAACAACGG CCAGCTGCTG TTTGGCAAGG CCCTGCTGCT GCAACAGGAC
GGCCGTCCCG ACGAGGCCCT GAGCCTGCTC GAGGACAATT CCGCGAGCCG TCACGACGTC
GCCCCGCTGC TGCTGCGCTC GCGCCTGCTG CAGAGCATGA AGCGCAGCGA CGAGGCCCTG
CCGCTGCTCA AGGCCGGGAT CAAGGAACAC CCGGACGACA AGCGCGTGCG CCTGGCCTAC
GCGCGCCTGC TGGTGGAACA GAATCGCCTG GACGACGCCA AGGCCGAGTT CGCCGGACTG
GTCCAGCAGT TCCCCGACGA CGACGACCTG CGCTTCTCCC TGGCGTTGGT CTGCCTGGAG
GCCCAGGCCT GGGACGAGGC CAGGGTCTAC CTGGAGGAAC TGGTCGAGCG CGAGAGCCAT
GTCGACGCCG CCCACTTCAA CCTCGGCCGC CTGGCCGAGG AACAGAAGGA CACCGCACGC
GCCCTCGACG AATACGCCCA GGTCGGCCCG GGCAATGACT TCCTCCCGGC ACAACTGCGC
CAGACCGACG TCCTGCTCAA GGCCGGGCGC GTCGACGAAG CCGCCCGGCG CCTGGACAAG
GCGCGCAGCG AGCAGCCCGA CTATGCCATC CAGCTGTACC TGATCGAAGC CGAGGCACTG
TCCGGCAACG AGCAGCAGGA AAAGGCCTGG CAGGCCATCC AGGAAGGCCT GAAGCAGTAT
CCGGAGGACC TCAACCTGCT CTATACCCGC TCGATGCTGG CGGAAAAGCG CAACGACCTG
GCGCAGATGG AAAAGGACCT GCGCTTCGTC ATCGCCCGCG AGCCGGACAA CGCCATGGCC
CTCAACGCCC TCGGCTACAC CCTGGCCGAC CGCACCACCC GCTACGCCGA GGCCCGCGAG
CTGATCCTCA AGGCGCACAA GCTGAACCCG GACGACCCGG CGATCCTCGA CAGCATGGGC
TGGATCAACT ATCGCCAGGG CAAGCTGGCG GATGCCGAGC GCTACCTGCG CCAGGCACTG
CAACGTTATC CCGACCACGA GGTCGCCGCG CACCTGGGCG AAGTCCTCTG GGCCCAGGGG
CGCCAGGGCG ACGCCCGGGC CATCTGGCGC GAATACCTCG ACAAGCAGCC CGACAGCGAC
GTGCTGCGCC GCACCATCAA GCGCCTGACC GGCGCCGAGA CTCCTTGA
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| Protein sequence | MNKSLALLTV TLLLGGCQSL THKTPDGTPP VEDTAAETQA KPEKYGSFSE DSLYSLLVAE
LAGQRNRFDI ALSNYVVQAQ KTRDPGVSER AFRIAEYLGA DQEALDTSLL WARSAPDNLD
AQRAAAIQLA RAGRYEESMV YMEKVLNGQG DTHFDFLALS AAETDPDTRA GLLQSFDHLL
KKYPNNGQLL FGKALLLQQD GRPDEALSLL EDNSASRHDV APLLLRSRLL QSMKRSDEAL
PLLKAGIKEH PDDKRVRLAY ARLLVEQNRL DDAKAEFAGL VQQFPDDDDL RFSLALVCLE
AQAWDEARVY LEELVERESH VDAAHFNLGR LAEEQKDTAR ALDEYAQVGP GNDFLPAQLR
QTDVLLKAGR VDEAARRLDK ARSEQPDYAI QLYLIEAEAL SGNEQQEKAW QAIQEGLKQY
PEDLNLLYTR SMLAEKRNDL AQMEKDLRFV IAREPDNAMA LNALGYTLAD RTTRYAEARE
LILKAHKLNP DDPAILDSMG WINYRQGKLA DAERYLRQAL QRYPDHEVAA HLGEVLWAQG
RQGDARAIWR EYLDKQPDSD VLRRTIKRLT GAETP
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