| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5300 |
|---|
| Symbol | |
|---|
| ID | 5357581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5457244 |
|---|
| End bp | 5458032 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640814346 |
|---|
| Product | putative pili assembly chaperone |
|---|
| Protein accession | YP_001350632 |
|---|
| Protein GI | 152984658 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTC CACATCCACC TCTCCGCCCC GGCCTCTGGC TTGCGGCGCT GCTGACGCTG
CTCCTGGGCG ACCCGGCACA GGCCGCCAGC GCGGTGCTGA TCTGGCCGAT CAACCCGGCC
ATCGAAGCCG ACCAGCCGGC CACGGCGATG TGGCTGGAGA ATCGCGGCAA GCAACCGGTG
ACCCTGCAGG TACGGGTGCT CGGCTGGTCC CAGGCGGATT TCCAGGACGT CTACCGCAAC
CAGCAGGCGG TGATTCCCAG CCCGCCCTTC GTCAAGGTCG AGCCGGGTCG CCGGCAACTG
GTCCGGCTGA TTCGCCAGGG CGGCCAGCCC AGCACGCCGG AGGACGCCTA CCGGGTGTTG
ATCGACGAAG TGCCCGACGG TAGCGCGGGG CAGGCGCAAC GAAGCCCCGG TCTCGCCCTG
CAGTTCCAGA TGCGCTATTC GGTACCGCTG TTCGTCAGCG CCGACGGCGT CTGGACCCAG
CCGCGCAGCG ATGTCGAGCG CGACCCGGCC GACGCGACCC GGCCGAAGCT GGCCTGGCGG
CTGGTCGAGG AACAGGGCAA GCGTTACCTG CAGGTGCGCA ACGAGGGTAG CGTGCACGCC
CGCCTCAGCC ATGTCCGCTG GGAGGGCAAC GGCCGCAGCC TGGCGCTGCT GGACGGCCTG
CTCGGCTACG TCCTGCCCGG CCGGCAGATG CGCTGGCCGC TGCCGCCGGG GCTGCTGCCG
GACGCCGGCA TGACCCTGAA ACTGCAACTG GCGGACAACG ACGCGCCGAT CAGCGTTCCC
GGATACTGA
|
|---|
| Protein sequence | MPSPHPPLRP GLWLAALLTL LLGDPAQAAS AVLIWPINPA IEADQPATAM WLENRGKQPV
TLQVRVLGWS QADFQDVYRN QQAVIPSPPF VKVEPGRRQL VRLIRQGGQP STPEDAYRVL
IDEVPDGSAG QAQRSPGLAL QFQMRYSVPL FVSADGVWTQ PRSDVERDPA DATRPKLAWR
LVEEQGKRYL QVRNEGSVHA RLSHVRWEGN GRSLALLDGL LGYVLPGRQM RWPLPPGLLP
DAGMTLKLQL ADNDAPISVP GY
|
|---|
| |