Gene PSPA7_5260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5260 
Symbol 
ID5353925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp5413929 
End bp5414927 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID640814306 
Productputative c4-dicarboxylate-binding protein 
Protein accessionYP_001350592 
Protein GI152985675 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGC CGTTTGTCGG TGTGGCGCTT GCCGCACTGT TCGCCGTTTC CGCCGCCGTC 
CATGCCGAGG ACACCGGTCC GATCGTGATC AAGTTCTCCC ACGTGGTCTC CGACGACACC
CCCAAGGGCA GGGGGGCCCT GCTGTTCAAG AAGCTCGCCG AGGAGCGCCT GCCGGGCAAG
GTCAAGGTCG AGGTCTACCC CAACTCGACG CTGTTCGGCG ACGCCGACGA GATCGAGGCC
CTGCGCGCCA ACAAGGTGCA GATGCTGGCC ACCTCGCTGT CCAAGTTCGA ACCCTATACC
AAGCAACTCC AGGTGTTCGA CCTGCCGTTC CTGTTCGACG ACCTGGAAGC CCTGAAGCGC
TTCCAGAAAC GCGACAAGAG CCGCGAGCTG CTGCGCTCCA TGGCCAAGCA CGGGATCTAC
GGCCTGGCCT ACTGGAACAA CGGCATGAAG CAGCTTTCCG CCACTCGCGA GCTGCGCCAG
CCGGGCGACG CCAAGGGCCT GGTGTTCCGC ATCCAGCCGT CGTCGGTGCT GGAGGCGCAG
TTCGACATGC TCGGCGCCAC CGCCAGGCAG CTGTCCTACG CCGAGACCCT CAAGGCCATG
CAGGCCGGCA GCGTGCAGGG CACCGAGAAC ACCTGGTCGA ACCTGGCCGG GCAGAAGATC
GACAGCGTGC AGCCGTATAT CACCGAATCC AACCATGGCG CGCTCAGCTA CATGCTGATC
ACCAGTTCGG CGTTCTGGAC CGGCATTCCC TACCAGACCC GCACCGAGCT GGAGAGCATC
GTCGACGAGG TCACCCTGGT GGTGAACAAG GAGGCCGAGG CACTCAACCA GAAGGAGCGC
GAACACCTGC TGGCCGCCGG CAGGAGCCGT CTGGTCAGCC TCAGCGCCGA GGAGCACCAG
GCCTGGCGCA ACGCGATGAA GCCGCTGTGG AAGAACTACG AGGCGCAGAT CGGCAGCGAT
GTGCTGCGCG CGGCCCAGGT GGTCAACCGC AAGCGCTGA
 
Protein sequence
MFKPFVGVAL AALFAVSAAV HAEDTGPIVI KFSHVVSDDT PKGRGALLFK KLAEERLPGK 
VKVEVYPNST LFGDADEIEA LRANKVQMLA TSLSKFEPYT KQLQVFDLPF LFDDLEALKR
FQKRDKSREL LRSMAKHGIY GLAYWNNGMK QLSATRELRQ PGDAKGLVFR IQPSSVLEAQ
FDMLGATARQ LSYAETLKAM QAGSVQGTEN TWSNLAGQKI DSVQPYITES NHGALSYMLI
TSSAFWTGIP YQTRTELESI VDEVTLVVNK EAEALNQKER EHLLAAGRSR LVSLSAEEHQ
AWRNAMKPLW KNYEAQIGSD VLRAAQVVNR KR