Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5260 |
Symbol | |
ID | 5353925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5413929 |
End bp | 5414927 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640814306 |
Product | putative c4-dicarboxylate-binding protein |
Protein accession | YP_001350592 |
Protein GI | 152985675 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGC CGTTTGTCGG TGTGGCGCTT GCCGCACTGT TCGCCGTTTC CGCCGCCGTC CATGCCGAGG ACACCGGTCC GATCGTGATC AAGTTCTCCC ACGTGGTCTC CGACGACACC CCCAAGGGCA GGGGGGCCCT GCTGTTCAAG AAGCTCGCCG AGGAGCGCCT GCCGGGCAAG GTCAAGGTCG AGGTCTACCC CAACTCGACG CTGTTCGGCG ACGCCGACGA GATCGAGGCC CTGCGCGCCA ACAAGGTGCA GATGCTGGCC ACCTCGCTGT CCAAGTTCGA ACCCTATACC AAGCAACTCC AGGTGTTCGA CCTGCCGTTC CTGTTCGACG ACCTGGAAGC CCTGAAGCGC TTCCAGAAAC GCGACAAGAG CCGCGAGCTG CTGCGCTCCA TGGCCAAGCA CGGGATCTAC GGCCTGGCCT ACTGGAACAA CGGCATGAAG CAGCTTTCCG CCACTCGCGA GCTGCGCCAG CCGGGCGACG CCAAGGGCCT GGTGTTCCGC ATCCAGCCGT CGTCGGTGCT GGAGGCGCAG TTCGACATGC TCGGCGCCAC CGCCAGGCAG CTGTCCTACG CCGAGACCCT CAAGGCCATG CAGGCCGGCA GCGTGCAGGG CACCGAGAAC ACCTGGTCGA ACCTGGCCGG GCAGAAGATC GACAGCGTGC AGCCGTATAT CACCGAATCC AACCATGGCG CGCTCAGCTA CATGCTGATC ACCAGTTCGG CGTTCTGGAC CGGCATTCCC TACCAGACCC GCACCGAGCT GGAGAGCATC GTCGACGAGG TCACCCTGGT GGTGAACAAG GAGGCCGAGG CACTCAACCA GAAGGAGCGC GAACACCTGC TGGCCGCCGG CAGGAGCCGT CTGGTCAGCC TCAGCGCCGA GGAGCACCAG GCCTGGCGCA ACGCGATGAA GCCGCTGTGG AAGAACTACG AGGCGCAGAT CGGCAGCGAT GTGCTGCGCG CGGCCCAGGT GGTCAACCGC AAGCGCTGA
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Protein sequence | MFKPFVGVAL AALFAVSAAV HAEDTGPIVI KFSHVVSDDT PKGRGALLFK KLAEERLPGK VKVEVYPNST LFGDADEIEA LRANKVQMLA TSLSKFEPYT KQLQVFDLPF LFDDLEALKR FQKRDKSREL LRSMAKHGIY GLAYWNNGMK QLSATRELRQ PGDAKGLVFR IQPSSVLEAQ FDMLGATARQ LSYAETLKAM QAGSVQGTEN TWSNLAGQKI DSVQPYITES NHGALSYMLI TSSAFWTGIP YQTRTELESI VDEVTLVVNK EAEALNQKER EHLLAAGRSR LVSLSAEEHQ AWRNAMKPLW KNYEAQIGSD VLRAAQVVNR KR
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