Gene PSPA7_5246 details

Gene Information

• Locus tag: PSPA7_5246
• ID: 5356759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5401287
• End bp: 5403353
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640814292
• Product: hypothetical protein
• Protein accession: YP_001350578
• Protein GI: 152986688
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1966] Carbon starvation protein, predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.526555
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATA ACAATAGCCT GCTACGTCAC CTCGCCTGGC TGGTGGTGGC GATCGTGGGC 
GCCGCGGCCC TGGGCGTCGT CGCCCTGCGT CGCGGCGAAG CGATCAATGC CTTGTGGATC 
GTGGTCGCGG CGGTGGCCAT CTACCTGGTC GCCTACCGCT ACTACAGCCT GTTCATCGCC 
AGCAAGGTGA TGCAACTGGA CCCCAACCGC GCGACCCCCG CGGTGCTCAA CAACGATGGC 
CTGGACTACG TCCCGACCAA CAAGCACATC CTCTTCGGTC ACCATTTCGC CGCCATCGCC 
GGCGCCGGCC CGCTGGTCGG CCCGGTGCTC GCCGCACAGA TGGGCTACCT GCCCGGCACG 
CTCTGGCTGA TCGCTGGCGT AGTCCTCGCC GGCGCGGTGC AGGACTTCAT GGTCCTGTTC 
ATTTCCAGCC GGCGCAACGG CCGCTCGCTG GGCGAGCTGG TGCGCGAGGA AATGGGCCAG 
GTGGCCGGCA CCATCGCGCT GTTCGGCGCC TTCCTGATCA TGATCATCAT CCTCGCGGTG 
CTCGCGCTGA TCGTGGTGAA GGCCCTGGCC GACAGCCCGT GGGGCATGTT CACCGTGCTC 
GCGACCATCC CGATCGCGCT GTTCATGGGC GTCTACATGC GCTTCATCCG GCCCGGCCGG 
ATCGGCGAGA TCTCGATCAT CGGCGTGCTC CTCCTGCTCG GCTCGATCTG GCTCGGCGGC 
CAGGTGGCGG CCAGCCCGGA ATGGGCGCCG CACTTCACCT TCAGCGGGAT CCAGATCACC 
TGGATGCTGA TCGGCTACGG CGCCGTCGCC TCGGTGCTGC CGGTATGGCT GCTGCTGGCG 
CCGCGCGACT ATCTGTCGAC CTTCCTCAAG ATCGGCACCA TCATCGGCCT GGCGATCGGC 
ATCCTGATCG TCATGCCGGA ACTGAAGATG CCGGCCCTGA CCCAGTTCAC CGACGGCACC 
GGCCCGGTCT GGAAGGGCAG CCTGTTCCCG TTCCTGTTCA TCACCATCGC CTGCGGCGCG 
GTGTCCGGCT TCCACGCGCT GATCTCCTCG GGGACCACGC CGAAGCTGCT CAACCGCGAG 
CCCGATGCCC GCTACATCGG CTACGGCGGC ATGCTGATGG AATCCTTCGT GGCGATCATG 
GCGATGGTTG CCGCCTCGGT GATCGAGCCG GGCATCTACT TCGCCATGAA CAGTCCGCCG 
GCGGTGGTCG GCGCCGACGT CAACGCGGTG GCCGCGACCG TCAGCAGTTG GGGCTTCGCC 
ATCACCCCGG ACCAGCTCAC CCAGACCGCC AGGGACATCG GCGAGACCAC CATCCTGGCC 
CGCGCCGGCG GCGCGCCGAC CCTGGCGGTG GGCATCGCGC ACATCCTTCA CCAGGTGCTG 
CCGGGCGAGA ACACCATGGC CTTCTGGTAC CACTTCGCGA TTCTCTTCGA GGCGCTGTTC 
ATCCTCACCG CGGTGGATGC CGGCACCCGC GCCGGGCGCT TCATGTTGCA GGACCTGCTG 
GGCAACTTCG TGCCGGCGCT GAAGAAGACC GAGTCGTGGA CCGCCAACAT CATCGGCACC 
GGCGGCTGCG TGGCGCTGTG GGGCTGGCTG CTGTACCAGG GCGTGGTCGA TCCGCTGGGC 
GGGATCAACA CCCTGTGGCC GCTGTTCGGC ATTTCCAACC AGATGCTCGC CGGCATCGCG 
CTGATGCTCG CCACCGTGGT CCTGATCAAG ATGAAGCGCC AGCAGTACGT CTGGGTGACC 
ATCCTGCCGG CCGCCTGGCT GCTGATCTGC ACCACCACCG CGGGCCTGAT CAAGATCTTC 
GACAGCAATC CGGCGGTCGG CTTCGTCGCC CTCGGCGAGA AGTACGCCAC CGCGCTGGAT 
GCCGGCCAGG TACTGGCTCC GGCCAAGGAT ATCGGCCAGA TGCAGCACGT GGTGCTGAAC 
GCCTACATCA ACGCCGGCCT GACCGTGCTG TTCCTGCTGG TGGTGTTCAG CGTACTGTTC 
TACGCCATCA AGGTCGGCAT CGCGGCCTGG GGCAAGAGCG AGCGGACCGA CAAGGAAACC 
CCGTTCCAGC CCATTCCCGA TGCCTGA 

 

Protein sequence

MNNNNSLLRH LAWLVVAIVG AAALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA 
SKVMQLDPNR ATPAVLNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT 
LWLIAGVVLA GAVQDFMVLF ISSRRNGRSL GELVREEMGQ VAGTIALFGA FLIMIIILAV 
LALIVVKALA DSPWGMFTVL ATIPIALFMG VYMRFIRPGR IGEISIIGVL LLLGSIWLGG 
QVAASPEWAP HFTFSGIQIT WMLIGYGAVA SVLPVWLLLA PRDYLSTFLK IGTIIGLAIG 
ILIVMPELKM PALTQFTDGT GPVWKGSLFP FLFITIACGA VSGFHALISS GTTPKLLNRE 
PDARYIGYGG MLMESFVAIM AMVAASVIEP GIYFAMNSPP AVVGADVNAV AATVSSWGFA 
ITPDQLTQTA RDIGETTILA RAGGAPTLAV GIAHILHQVL PGENTMAFWY HFAILFEALF 
ILTAVDAGTR AGRFMLQDLL GNFVPALKKT ESWTANIIGT GGCVALWGWL LYQGVVDPLG 
GINTLWPLFG ISNQMLAGIA LMLATVVLIK MKRQQYVWVT ILPAAWLLIC TTTAGLIKIF 
DSNPAVGFVA LGEKYATALD AGQVLAPAKD IGQMQHVVLN AYINAGLTVL FLLVVFSVLF 
YAIKVGIAAW GKSERTDKET PFQPIPDA