| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5231 |
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| Symbol | |
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| ID | 5356740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5379745 |
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| End bp | 5381025 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814277 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001350563 |
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| Protein GI | 152988762 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTG ACCGGTTGTT TTCCCGGGGG CGGCGTTTGC TGCTGATCGC CGCTGCCCTG
CTGGCCGCCG TCGCGCTGCC GACCTGGCTG CTGTTCGGCG GGGGGGCAGT TCCACGCGAC
GAAGACGAGC GCTGGATCGA TGTACGCCCG TCGGCGCTGG TGCACCGGAT AGGCCTGGTC
GGGCGCCTGG AACCGGGGCG GGTGGTGACC TTGGCGGCGC CCTTCGCCGG CAATGTCGAG
GCACTGCTGG TGCAACCCGG GCAGCGGGTC GAGGAAGGGC AGGAACTGTT GCGCATGGAC
ACTCGCGAGA TCGCCGTGCA GGTTCGCGAG GCCCGCTCGG CGCTGCTCAA GGCCCGGCGG
ACCTTGCAGG AGTTGCGGGA CTGGGAGCGC GGCGAGAACA TGACGCGCGC CCGCCGGGCC
CTGCGCAGCG CGCAGCTAGC ACAGGACAGC ACCGAACGAA AGTTGCGCGA GACCCGGCAA
CTCTTCGGCA AGGGCATCGT TCCGCGCAAC GAACTCGACG ACCTCGAACA GCAGGCGCGT
CAACAGCGGA TGGATCTGGA GGCTGCCCGC CTGGAAGTGG AGGCGACGCG CAGCAAGGGG
CAGGGGGAAA ACCTGCAGAT CGCCGAGATG GACCTGGCCA ATGCCACGGT GAAGTTCGAG
ACGCTGCAGG CGCAGTTGGA TGGGCGGACG GTCCGTGCGC CGTTCGCCGG CATCATCGTT
GTCGCTCCCG GGTCTTCGAA TGAGCAGGGC GTGCGGGAGC CGGTGCAGAC CGGAAGCAAG
CTGGGCCAGG GCCAGGCACT GTTCGGACTG GCCAGCGTGG AACGCCTGAA GGTTTCCGCC
AGGGTGTCGG AGCTGGACAT CAATCAACTG CGCGAAGGGC AGGAGGTCGA GGTGAGTGGT
GACGGTTTCG ACGGCATCGC CTTGAAAGGA GTCATCTCCG CTCTTGGCGG ACAGGCGCTG
CCGGGGGGCA CCCAGGGCAG CAGCCCACAG TTCGAGGTAA CGGTATCGGT GGCGCACCTC
ACCCCCGGCC AACTGAGGAA AATCCGCCTG GGCATGAGCG CCAAACTGGC GGTCACCACC
TATCGCAACG AGCGAGCACT CGTCGTGCCG CCCGAGGCCG TGCGTCATGA GGGCGATCGA
TTGTCCGTGG TTTACCGCGC GTCTCCTGCC GCCCCGATCG AGCAACTTCC TGTCCGGGTG
GGGCGTTCCA CTCCCGAGGG CGTCGAAGTA CTGGACCTGG CGGCGGGGCA GGTGCGCGTG
CACGTAGCGG ACGGGAGCTG A
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| Protein sequence | MTTDRLFSRG RRLLLIAAAL LAAVALPTWL LFGGGAVPRD EDERWIDVRP SALVHRIGLV
GRLEPGRVVT LAAPFAGNVE ALLVQPGQRV EEGQELLRMD TREIAVQVRE ARSALLKARR
TLQELRDWER GENMTRARRA LRSAQLAQDS TERKLRETRQ LFGKGIVPRN ELDDLEQQAR
QQRMDLEAAR LEVEATRSKG QGENLQIAEM DLANATVKFE TLQAQLDGRT VRAPFAGIIV
VAPGSSNEQG VREPVQTGSK LGQGQALFGL ASVERLKVSA RVSELDINQL REGQEVEVSG
DGFDGIALKG VISALGGQAL PGGTQGSSPQ FEVTVSVAHL TPGQLRKIRL GMSAKLAVTT
YRNERALVVP PEAVRHEGDR LSVVYRASPA APIEQLPVRV GRSTPEGVEV LDLAAGQVRV
HVADGS
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