| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5225 |
|---|
| Symbol | |
|---|
| ID | 5354075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5371401 |
|---|
| End bp | 5372615 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640814271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350557 |
|---|
| Protein GI | 152988687 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.891662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA TGAACATCCT CGAAGTCGCC GGCGGCAAGC CGATCAAGCT CTGGACCCAG
GGCGTCCCGG TGGAGGAAGA AGCGCGCCGG CAACTGATGA ACACGGCGAA GATGCCGTTC
ATCTTCAAGC ACCTGGCGGT GATGCCCGAC GTCCACCTGG GCAAGGGTTC GACCATCGGC
AGCGTGATCC CCACCCTCGG CGCGATCATC CCGGCGGCGG TGGGCGTGGA CATCGGTTGC
GGGATGATCG CCGCGCGGAC CTCGCTGGTC GCCGCCGATC TGCCGGACAA CCTGCACGGT
CTGCGCAGCG CCATCGAGCA GGCGGTGCCC CACGGCAAGA CCTTCGGCCG TCGCGACCGC
GGCGCCTGGC ATGAGGTGCC GGACGCCGCC GACCAGGCCT GGAAGGCGCT CGCCGGCCGC
TTCAGGGCGA TCACCGACAA GTACCCGCGG CTGGAGAAGA CCAACAACCG CCAGCACCTG
GGTACCCTCG GCACCGGCAA CCACTTCATC GAGGTCTGCC TGGACGAGGC CGATCGCGTC
TGGTTCATGC TGCACAGCGG TTCGCGCGGG GTCGGCAACG CCATCGGCAA CCTGTTCATC
GAACTGGCCA AGGCCGACAT GCGCCAGCAC ATCGCCAACC TGCCAGACAA GGACCTGGCC
TACTTCGAGG AGGGCAGCCG GCACTTCGAC GACTACGTGG AAGCGGTCGG CTGGGCCCAG
GACTTCGCCC GGCAGAACCG CGCGCTGATG ATGCACGCGG TGATCGAGGC GGCGCGCCAG
GTGATCCGCA AGCCGTTCGA GGCCAATCTC GAAGCGGTCA ACTGCCACCA CAACTACGTG
CAGAAGGAAC GCCACTTCGG CCAGGAGGTG CTGGTCACCC GCAAGGGCGC GGTGTCCGCG
CAGAAGGGCC AGCTCGGCAT CATCCCCGGC TCGATGGGCG CGAAGAGCTT CATCGTCCGC
GGCCTCGGCA ACCAGGAAGC GTTCTGCTCG TGCAGCCACG GGGCCGGGCG GACCATGAGC
CGGACCCAGG CGAAGAAGGT CTTCAGCGTC GAAGACCAGA TCCGCGCCAC CGCCCACGTC
GAATGCCGCA AGGACGCCGA CGTGATCGAC GAGATCCCGA TGGCCTACAA GGACATCGAC
CGGGTCATGG AAGCCCAGCG CGAGCTGGTG GAAGTGCTGC ACACCCTGCG TCAGGTGGTG
TGCGTGAAAG GATGA
|
|---|
| Protein sequence | MKDMNILEVA GGKPIKLWTQ GVPVEEEARR QLMNTAKMPF IFKHLAVMPD VHLGKGSTIG
SVIPTLGAII PAAVGVDIGC GMIAARTSLV AADLPDNLHG LRSAIEQAVP HGKTFGRRDR
GAWHEVPDAA DQAWKALAGR FRAITDKYPR LEKTNNRQHL GTLGTGNHFI EVCLDEADRV
WFMLHSGSRG VGNAIGNLFI ELAKADMRQH IANLPDKDLA YFEEGSRHFD DYVEAVGWAQ
DFARQNRALM MHAVIEAARQ VIRKPFEANL EAVNCHHNYV QKERHFGQEV LVTRKGAVSA
QKGQLGIIPG SMGAKSFIVR GLGNQEAFCS CSHGAGRTMS RTQAKKVFSV EDQIRATAHV
ECRKDADVID EIPMAYKDID RVMEAQRELV EVLHTLRQVV CVKG
|
|---|
| |