| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5221 |
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| Symbol | rtcR |
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| ID | 5353557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5367945 |
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| End bp | 5369543 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640814267 |
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| Product | transcriptional regulator RtcR |
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| Protein accession | YP_001350553 |
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| Protein GI | 152988311 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGAAAC GCACGGTCGC CATCGGCTTC ATCGGCACCA CCCTCGACCG TCTCGGCAAG
GGCGCGGCGC GCTGGCAAAA GTGGCGGCCG AGCATCGGCC TGTGCCAGCA GCCGGACCTG
CTGATCGACC GCCTCGAACT GATCCACGGC GACGACGCCC GCGATCTCGG CCTGGCCGAG
CGGATCCGCG CCGACATCGC CGCGGTGTCG CCGCACACCG AGGTGCGCCT GCAGCCGATG
GCGCTGCGCA ACCCCTGGGA CTTCGAGGAG GTCTATGGCG CCCTGCACGA TTTCGTCAGC
GCCTATCCCT TCGACACCGA GCGCGAGGAC TACCTGGTGC ACATCACCAC CGGGACCCAT
GTCGCGCAGA TCTGCTGGTT CCTCCTTACC GAGGCGCGCT ACCTGCCGGC CCGGCTGGTG
CAGACCTCGC CGTCGCGGCG CAAGGACGAG GCGCGCCATC CCGAGGGCTC GGCGACGTTG
ATCGACCTCG ACCTGTCCCG CTACGACCGC ATCGCCTCGC GGTTCCGCCG TGAACAGGAG
GAAAGCCTGG CTTTGCTCAA GTCGGGAATC GCCACGCGCA ATGCCGCTTT CAACCGTTCC
ATCGAGCAGA TCGAGCGGGT CGCCGTGCGT TCCCGGGCGC CAATGCTGCT GGTGGGGCCG
ACCGGCGCCG GCAAATCGTT CCTCGCCCGG CGCATTTACG AACTCAAGCG CAGCCGGCAC
CAGCTCGATG GGCGCTTCGT CGAGGTCAAC TGCGCCACCT TGCGCGGCGA CGGCGCGATG
TCGGCACTGT TCGGCCACGT CAAGGGCGCC TTCACCGGCG CGCAGAACGC GCGCGAAGGC
CTGCTGCGCG CAGCCGACGG TGGCATGCTG TTCCTCGACG AGATCGGCGA GCTGGGTGCC
GACGAACAGG CGATGCTGCT CAAGGCGATC GAAGAGAAGC GCTTCTTCCC GCTGGGTTCG
GACCGTGAGG TGGAGAGCGA CTTCCAGCTC ATCGCCGGGA CCCACCGCGA CTTGCGCGGA
CGAGTGGCCG AAGGCCTGTT CCGCGAGGAC CTGTTCGCCC GCATCAACCT GTGGACCTTC
GAGCTACCGG GTCTGGCCGG GCGCCGCGAG GACATCGAGC CGAACATCGA CTTCGAACTG
GAGCGGCACG CCCGCGAGCA GGGGCGGCAG GTGCGCTTCA ACCTGGAGGC CAAGCGTCGC
TACCTGGCCT TCGCCGGTTC CAGCGAAGCG CGCTGGGCCG GCAACTTCCG CGAGCTGTCG
GCTTCCATCA CACGGATGGC CACCCTCGCC GACAGCGGGC GGATCGACGA GGCGCTGGTC
GAGGAGGAGA TCCTCCGCCT GCGCCAGGCC TGGGGGCTCG ATGCGGGGCG GGAGCCACTG
GCTGAGCTGC TGGGGCAGCG GGTGGAGGCC CTGGATCTGT TCGACCGCCT GCAACTGCAG
GCGGTGCTGG AGGTGTGCCG CGGGGCTAAG ACCCTTTCCG AGGCGGGACG CCGGCTGTTC
GCCGTTTCGC GCGAGGGCAA GCGCAACCCC AACGACGCCG ACCGACTGCG CAAGTTCCTG
GCTCGTTTCG GCCTGGATTG GGCGCAGATA CGCGCCTGA
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| Protein sequence | MMKRTVAIGF IGTTLDRLGK GAARWQKWRP SIGLCQQPDL LIDRLELIHG DDARDLGLAE
RIRADIAAVS PHTEVRLQPM ALRNPWDFEE VYGALHDFVS AYPFDTERED YLVHITTGTH
VAQICWFLLT EARYLPARLV QTSPSRRKDE ARHPEGSATL IDLDLSRYDR IASRFRREQE
ESLALLKSGI ATRNAAFNRS IEQIERVAVR SRAPMLLVGP TGAGKSFLAR RIYELKRSRH
QLDGRFVEVN CATLRGDGAM SALFGHVKGA FTGAQNAREG LLRAADGGML FLDEIGELGA
DEQAMLLKAI EEKRFFPLGS DREVESDFQL IAGTHRDLRG RVAEGLFRED LFARINLWTF
ELPGLAGRRE DIEPNIDFEL ERHAREQGRQ VRFNLEAKRR YLAFAGSSEA RWAGNFRELS
ASITRMATLA DSGRIDEALV EEEILRLRQA WGLDAGREPL AELLGQRVEA LDLFDRLQLQ
AVLEVCRGAK TLSEAGRRLF AVSREGKRNP NDADRLRKFL ARFGLDWAQI RA
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