Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5211 |
Symbol | |
ID | 5358107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5357314 |
End bp | 5359341 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640814257 |
Product | putative cytochrome c |
Protein accession | YP_001350543 |
Protein GI | 152988521 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0072933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTT CTTTCCCGCG CCTCGGCTTG CTCGGCGCGC TGTGCTCCAT CGTTCCCCTG CTTCATGCCA GCGAACCGGC CACGGACGCC GCACTGATCG AAAAAGGCCG CTACGTGGCC CAGCTCGGCG ACTGCGTCGC CTGCCACACC GCCCCGCAAG GCGCACCGAT GGCCGGCGGC CTGGAGCTGA AGACGCCGAT GGGCACCATC TACTCGACCA ACATCACCCC CGACCCGGAG ACGGGCATCG GCCGCTACAG CTTCGAACAG TTCGACCGCG CCATGCGCAA GGGCGTCAGC GCCGCAGGCG AGAACCTCTA TCCGGCGATG CCCTATCCGT CCTACGCCAA GGTCAGCGAA GATGACATGC GCGCGCTATA CGCCTACCTG ATGCATGGCG TACAGCCGGT CAACCGGGCG AACACGCCGA GCGCGATGAG CTGGCCGTTC AACCAGCGCT GGGGCCTGGC GCTGTGGAAC TGGGCGTTCC TCGACGACAC ACCGTTCACC CCCTCCAGCG ACGCGGACCC GATGATCAAC CGCGGCGCCT ACCTGGTGCA GGGCCTCGGC CACTGCGGCG CCTGCCATAC TCCGCGCGGC ATCGCCTTCC AGGAAAAGGC CATGAGCGAC GCGGGCCGCT CCGGGCAGCT CTACCTCGCC GGCGAGACCG TCGAGCAATG GCAGGCGCTG AGCCTGCGCA ACCTGTGGAC GGTGGAGGAC ACCGTGCAAC TGCTGAAGAC CGGGCAGAAC CGCTTCGCCA CGGTATCCGG CAGCATGACC GACGTGATCC ACCACAGCAC CCAGCACTTC AGCGACGACG ACCTGGTGGC CATCGCCAGC TACCTGAAAT CCCTGCCGGC CGGCAAGGAC GACCTGCCGA TGCCCGCCAG CGAACGCCCG CCGACCACTC CGGACGACCT CTACAGCTCG CGCGGCGGCC TCGGCTACGC GCAGTTCTGT TCCGATTGCC ACCGCAAGGA CGGTAGCGGC GTGCCGGGCA TGTTCCCGCC GCTGGCCGGC AACCCCACCG TCGCCTCCGC CAATCCGAGC ACCCTGCTGC ACATCACCCT CACCGGCTGG AAGACCGCGG AAACCGCCAC TCATTCGCGG GTCTACACCA TGCCCGGGTT CGCCCAGCTG GAGGATCGCG AGATCGCCGA GATCCTCAGC TTCGTCCGCG GCAGCTGGGG CAACCATGGC TCGGCGATCG ACGCCGGCCA GGTGAACAAA CTGCGGCGGC AGGTCGAAGC CGGCAGCGGC CCGAGCGGCG CGTTCGTCTC CCCGCGCCTG GCGGACATGC TCGCTGCGCC GAACGCCGAA CAGGTGGTGC GCGGCATGCG CCTGCATCTG GAAACCCGCG AACTGTTGCC GGACAACGTC GGCAACCAGC TCAACTGCAC CAGCTGCCAC CTGAACGCCG GGACCGTCGC CGACGGCTCG CCCTTCGTCG GCGTCTCGGC GTTCTTCCCC GGCTACGCGC CACGGGCGGG CAAGGTCATC GACCTGGAGG AACGCATCAA CGGCTGCTTC CGCCGTTCGA TGAACGGCAA GCCGCTGCCG CCGGAATCGG CCGACATGCA GGCGATGGTG GCCTATTTCG ACTGGATGAA GAACAACACC CGACCGGAGG ACAAGGTCGC CGGACGCGGC GTCGGCAAGG TCGACCCGGC GCTCAGGCCC GACCCGGAAA ACGGTCGCAG GGTCTATGCG CAGCAATGCG CGGTGTGCCA CGGCGAGAAC GGCGAAGGCC TGCGCAACGC CGCCGGGGAG ATGCTCTTCC CGCCGCTGTG GGGCGAACAG TCGTTCAATA TCGGCGCCGG CATGGCGCGG ACCTTCACCG CTGCCGCCTT CGTCAAGCAC AACATGCCGA TCGGCTTCCA GGAACGCTTC CCGCTCGGCC AGGGCGGCCT CAGCGACCAG GACGCAGTGG ACGTCGCGGA GTACTTTTCG CACCAGCCGC GCCCGGACTT CCCGGACAAG ATCAAGGACT GGCCGAAGGA CAAGCGTCCG CTGGATGCCC GCTACTGA
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Protein sequence | MPASFPRLGL LGALCSIVPL LHASEPATDA ALIEKGRYVA QLGDCVACHT APQGAPMAGG LELKTPMGTI YSTNITPDPE TGIGRYSFEQ FDRAMRKGVS AAGENLYPAM PYPSYAKVSE DDMRALYAYL MHGVQPVNRA NTPSAMSWPF NQRWGLALWN WAFLDDTPFT PSSDADPMIN RGAYLVQGLG HCGACHTPRG IAFQEKAMSD AGRSGQLYLA GETVEQWQAL SLRNLWTVED TVQLLKTGQN RFATVSGSMT DVIHHSTQHF SDDDLVAIAS YLKSLPAGKD DLPMPASERP PTTPDDLYSS RGGLGYAQFC SDCHRKDGSG VPGMFPPLAG NPTVASANPS TLLHITLTGW KTAETATHSR VYTMPGFAQL EDREIAEILS FVRGSWGNHG SAIDAGQVNK LRRQVEAGSG PSGAFVSPRL ADMLAAPNAE QVVRGMRLHL ETRELLPDNV GNQLNCTSCH LNAGTVADGS PFVGVSAFFP GYAPRAGKVI DLEERINGCF RRSMNGKPLP PESADMQAMV AYFDWMKNNT RPEDKVAGRG VGKVDPALRP DPENGRRVYA QQCAVCHGEN GEGLRNAAGE MLFPPLWGEQ SFNIGAGMAR TFTAAAFVKH NMPIGFQERF PLGQGGLSDQ DAVDVAEYFS HQPRPDFPDK IKDWPKDKRP LDARY
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