| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5183 |
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| Symbol | rluD |
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| ID | 5359501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5329654 |
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| End bp | 5330616 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814229 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001350515 |
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| Protein GI | 152986388 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.521194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA TGATTCAACG CGCGGCCGAG GTGCCGTTCG AGCTGGGTGG CCAGCGTCTC
GACCAGATCG CCGCCCAGCT TTTTCCCGAA CACTCGCGCT CCCGCCTGGC CGGCTGGATC
AAGGACGGTC GGCTGACCGT CGATGGCGCC GCGGCGCGCC CGCGCGACAT CGTCCACAGC
GGGGCGCAGC TGGTCCTGGA AGCCGAGCAG GAGGCCCAGG GCGAGTGGGT CGCACAGGAT
ATCGAGCTGG ATATCGTCCA TGAAGACGAG CATATCCTGG TGATCGACAA GCCTGCCGGT
CTGGTGGTCC ACCCGGCTGC CGGCCACCAG GATGGCACCC TGCTCAACGC CTTGCTGTAC
CACGTGCCGG GCATCGCCAA CGTGCCGCGT GCGGGCATCG TCCACCGCCT GGACAAGGAC
ACCACCGGCC TGATGGTGGT GGCCAAGACC CTGGAGGCCC ATACCAAGCT GGTCGCGCAG
TTGCAGGCGC GCTCGGTCAG CCGCATCTAC GAGGCGATCG TGATCGGCGT GATCACTTCC
GGCGGCACCA TCGATGCGCC GATCGGCCGG CACGGCGTGC AGCGGCAGAA GATGGCGGTG
GTCGATGCCG GCAAGGTGGC TGTGAGCCAT TACCGGGTGC TGGAACGCTT CCGCGCGCAC
ACCCACACCC GGGTCAAGCT GGAGACCGGG CGCACCCACC AGATCCGCGT GCACATGAGC
CACATCGGCT ATCCGCTGGT CGGCGATCCG GTCTATGGCG GCCGCTTCAA GATCCCGCCG
GTGGCCAGCC AGACGCTGGT CCAGACCCTC CGCGAGTTCC CGCGCCAGGC GCTGCACGCG
CGCTTCCTCG AACTGGACCA CCCGGCGACG GGCGTACGCA TGAAGTGGGA GTCGCCGCTG
CCGGAAGACT TCCTCTGGTT GCTCAGCCTG CTGCGCCAGG ACCGCGAGGC GTTCGTCGGA
TGA
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| Protein sequence | MSDMIQRAAE VPFELGGQRL DQIAAQLFPE HSRSRLAGWI KDGRLTVDGA AARPRDIVHS
GAQLVLEAEQ EAQGEWVAQD IELDIVHEDE HILVIDKPAG LVVHPAAGHQ DGTLLNALLY
HVPGIANVPR AGIVHRLDKD TTGLMVVAKT LEAHTKLVAQ LQARSVSRIY EAIVIGVITS
GGTIDAPIGR HGVQRQKMAV VDAGKVAVSH YRVLERFRAH THTRVKLETG RTHQIRVHMS
HIGYPLVGDP VYGGRFKIPP VASQTLVQTL REFPRQALHA RFLELDHPAT GVRMKWESPL
PEDFLWLLSL LRQDREAFVG
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