| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5162 |
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| Symbol | pilB |
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| ID | 5359258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5309526 |
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| End bp | 5311211 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640814208 |
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| Product | type 4 fimbrial biogenesis protein PilB |
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| Protein accession | YP_001350497 |
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| Protein GI | 152987434 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGGAC TGGCCAGGCA ACTGGTTCTC TCCAATCTTC TGGATGAAAA TGCCGCCCAG
CAGGCCCATT TGCAAGCCCA GCGCAGCAAG CTGCCCCTGG TCACCTATCT GGTACAGAAC
AAGCTGGTCA AGAGTCGCGA TTTGCTGGAA CTGACAGCTG AACAGTTCGG CATCGCTTAC
GTAGATCTTG GTGCTCTGGA CAAGGAGAGT TTCCCCAAGG ATCTGATCAG CGAAAAACTC
TCTCGACAGC ACCGAGTCGT TCCACTGTGG CGACGCGGCA ACAAACTGTT CATCGGTCTC
TCCGACCCCG CCAACCACCA GGCGGTGTCT GACATTCAGT TCAGCACCGG GCTGACCACG
GAAGCGATCC TGGTCGAAGA CGACAAGCTG ACGCAGACCA TCGACAAGCT TTATGAAAAT
GCCACCGACA GCCTGGCTGG CCTGGACGAT GTCGATCTCG ACGGCCTGGA TGTATCCACC
GGCGACAGTT CGCCCCAGGA GGACGGTTCG GGCGGAGACG CCGACGACGC ACCGGTAGTG
CGCTTCGTCA ACAAGATGTT GCTGGACGCC ATCAAGGGCG GCTCTTCCGA CCTGCACTTC
GAACCCTACG AGAAGATCTA CCGGGTGCGC TTCCGTACCG ACGGCATGCT CCACGAAGTG
GCCAAGCCGC CGATCCAGCT GGCTAGCCGT ATATCTGCGC GTCTCAAGGT GATGGCCGGC
CTCGACATCT CCGAACGGCG CAAGCCGCAG GACGGGCGGA TCAAGATGCG CGTGTCGAAG
ACCAAGTCCA TCGATTTCCG GGTCAACACC CTGCCGACCC TCTGGGGCGA GAAGATCGTG
ATGCGGATCC TCGACTCCTC CAGCGCGCAG ATGGGCATCG ATGCGCTGGG CTACGAAGAG
GACCAGAAGG AACTCTACCT GGCCGCGCTC AAGCAGCCGC AGGGCATGAT CCTGGTCACC
GGCCCCACCG GTTCGGGCAA GACGGTCTCG CTGTACACCG GCCTGAACAT CCTCAATACA
ACCGATATCA ACATCTCCAC CGCCGAAGAT CCGGTGGAGA TCAACCTGGA AGGCATCAAC
CAGGTCAACG TCAACCCGCG CCAGGGCATG GACTTCTCCC AGGCGCTGCG CGCCTTCCTG
CGCCAGGATC CGGACGTGAT CATGGTCGGC GAGATCCGCG ACCTGGAAAC CGCCGAGATC
GCCATCAAGG CGGCGCAGAC CGGGCACATG GTGATGTCCA CCCTGCACAC CAACAGCGCC
GCCGAGACCC TCACCCGTCT GCTGAACATG GGCGTGCCGG CGTTCAACCT GGCGACCTCG
GTGAACCTGA TCATCGCCCA GCGCCTTGCG CGAAAACTCT GTTCGCATTG CAAGAAAGAA
CACGATGTTC CGAGGGAAAC TCTGCTTCAC GAGGGCTTCC CTGAAGAACT GATCGGCACC
TTCAAGCTGT ATTCGCCGGT GGGCTGTGAA AATTGCAAAG GCGGTTACAA AGGTCGCGTC
GGTATTTATG AAGTGGTTAA AAACACCCCC GCCCTGCAGC GGATTATCAT GGAGGAAGGC
AACTCCATCG AGATCGCCGA GCAAGCCCGC AAAGAAGGCT TCAACGATCT GCGCTCCTCA
GGCCTGCTGA AAGCCATGCA GGGAATCACC AGCCTGGAGG AAGTCAACCG CGTGACCAAG
GACTAA
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| Protein sequence | MTGLARQLVL SNLLDENAAQ QAHLQAQRSK LPLVTYLVQN KLVKSRDLLE LTAEQFGIAY
VDLGALDKES FPKDLISEKL SRQHRVVPLW RRGNKLFIGL SDPANHQAVS DIQFSTGLTT
EAILVEDDKL TQTIDKLYEN ATDSLAGLDD VDLDGLDVST GDSSPQEDGS GGDADDAPVV
RFVNKMLLDA IKGGSSDLHF EPYEKIYRVR FRTDGMLHEV AKPPIQLASR ISARLKVMAG
LDISERRKPQ DGRIKMRVSK TKSIDFRVNT LPTLWGEKIV MRILDSSSAQ MGIDALGYEE
DQKELYLAAL KQPQGMILVT GPTGSGKTVS LYTGLNILNT TDINISTAED PVEINLEGIN
QVNVNPRQGM DFSQALRAFL RQDPDVIMVG EIRDLETAEI AIKAAQTGHM VMSTLHTNSA
AETLTRLLNM GVPAFNLATS VNLIIAQRLA RKLCSHCKKE HDVPRETLLH EGFPEELIGT
FKLYSPVGCE NCKGGYKGRV GIYEVVKNTP ALQRIIMEEG NSIEIAEQAR KEGFNDLRSS
GLLKAMQGIT SLEEVNRVTK D
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