| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5139 |
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| Symbol | ampD |
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| ID | 5359019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5290912 |
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| End bp | 5291478 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640814185 |
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| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
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| Protein accession | YP_001350475 |
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| Protein GI | 152986644 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTTCG ATTCCGTCAC CGGCTGGGTC CAGGGGATCC GCCACTGTCC CTCACCGAAC
TTCAACCTGC GTTCGCAGGG GGAAGTGGTG TCGTTGCTGG TCATCCACAA CATCAGCCTG
CCACCGGGGC AGTTCGGCAC CGGCAAGGTC CAGGCCTTTT TCCAGAACCG CCTGGACGCG
GACGAGCACC CCTATTTCGC GGAAATCCGC CACCTGACGG TCTCCGCGCA TTTCCTCATC
GAACGCGACG GCGGCATCAC CCAGTTCGTC TCCTGCCACG ATCGCGCCTG GCACGCCGGG
GTGTCCTGCT TCGAAGGGCG CGAGGCGTGC AACGACTTTT TCCTGGGGGT CGAACTGGAA
GGGACCGACA CGGAACCGTA CACGGATGCG CAGTACACTG CCCTGGTCGG GTTGACGCGG
CTGTTGCGCG CGGCGTTTCC GGCGATCACC CGCGGGCGGA TCCAGGGGCA CTGCGATATC
GCTCCGCAGC GCAAGACCGA CCCCGGCGAG GCCTTCGACT GGCCGCGCTA CCGTGCCGGA
TTGACCGATT CCAAGGAGGA AACATGA
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| Protein sequence | MHFDSVTGWV QGIRHCPSPN FNLRSQGEVV SLLVIHNISL PPGQFGTGKV QAFFQNRLDA
DEHPYFAEIR HLTVSAHFLI ERDGGITQFV SCHDRAWHAG VSCFEGREAC NDFFLGVELE
GTDTEPYTDA QYTALVGLTR LLRAAFPAIT RGRIQGHCDI APQRKTDPGE AFDWPRYRAG
LTDSKEET
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