Gene PSPA7_5120 details

Gene Information

• Locus tag: PSPA7_5120
• Symbol: dppF
• ID: 5358742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5269706
• End bp: 5270677
• Gene Length: 972 bp
• Protein Length: 323 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640814166
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_001350456
• Protein GI: 152987310
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACCG TTCTGACCGC CCGTGATCTG ACCCGTCACT ACGAAGTCTC CCGCGGCCTG 
TTCAAGGGCC ACGCCCAGGT ACGCGCGCTG AACGGCGTGT CGTTCGAATT GGAAGCCGGC 
AAGACCCTCG CCGTGGTCGG TGAGTCCGGC TGCGGCAAGT CGACCCTGGC GCGCGCCCTG 
ACCCTGATCG AGGAACCCAC CTCCGGCTCG CTGAAAATCG CCGGGCAGGA AGTCAAGGGC 
GCCAGCAAGG ACCAGCGCCG GCAGTTGCGT CGCGACGTGC AGATGGTCTT CCAGAACCCC 
TACGCCTCGC TCAATCCGCG GCAGAAGATC GGCGACCAGC TGGCCGAGCC GCTGCTGATC 
AACACCGCGC TGTCGCGCGA GGAGCGCCGC GAGAAAGTCC AGCAGATGAT GCGCCAGGTC 
GGCCTGCGCC CGGAACACTA CCAGCGCTAT CCGCACATGT TCTCCGGCGG CCAGCGCCAG 
CGCATCGCCC TGGCCCGGGC GATGATGCTG CAACCCAAGG TGCTGGTGGC GGACGAGCCG 
ACCTCGGCCC TCGACGTGTC GATCCAGGCC CAGGTACTGA ACCTGTTCAT GGACCTGCAG 
CAGCAGTTCC GCACCGCCTA CGTGTTCATC TCGCACAACC TGGCGGTAGT CCGCCATGTC 
GCCGACGACG TTCTGGTGAT GTACCTCGGC CGACCGGCGG AGATGGGGCC GGCGGACAAG 
CTCTACGAGA ACCCTCTGCA TCCCTACACG CGCGCGCTGC TCTCGGCGAC CCCGGCGATC 
CATCCGGACC CGACGAAGCC GAAGATCCGC ATCCAGGGCG AACTGCCGAA CCCGCTGGAC 
CCGCCGCAGG GCTGCGCCTT CCACAAGCGC TGCCCCTACG CCACCGAGCG CTGCCGCAGC 
GAGGTGCCCG AGTTGCGCCC GCTCGACCAG CGCCAGGTGG CCTGCCACCA CGCCGAGCAG 
TTCCTCGGCT GA 

 

Protein sequence

METVLTARDL TRHYEVSRGL FKGHAQVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL 
TLIEEPTSGS LKIAGQEVKG ASKDQRRQLR RDVQMVFQNP YASLNPRQKI GDQLAEPLLI 
NTALSREERR EKVQQMMRQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP 
TSALDVSIQA QVLNLFMDLQ QQFRTAYVFI SHNLAVVRHV ADDVLVMYLG RPAEMGPADK 
LYENPLHPYT RALLSATPAI HPDPTKPKIR IQGELPNPLD PPQGCAFHKR CPYATERCRS 
EVPELRPLDQ RQVACHHAEQ FLG