Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5113 |
Symbol | |
ID | 5357642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5260924 |
End bp | 5261487 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640814159 |
Product | putative transcriptional regulator |
Protein accession | YP_001350449 |
Protein GI | 152985673 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTAG ACCGCATCGG CGAACGCCTG CGTCGCTATC GCCGCGCCGC CAAGAAAACC CTGCACCAAG TCGCCAGCGA ATCCGGTCTC ACCGCGAGCT TCCTTTCCCA GGCGGAGCGC AACCTCACCG GCGTATCGAT CTCCTCCCTG GCCAACATCG CCAAGTCGCT GAACATCCCG CTCAACGCCC TGTTCGACCA ACCGGCCCAG CCACAGCCCG ATTCCCACGA AGGCGAACGG GTGCGCTACA CCATCGAGGG CCAGCCGCTG GCCTACGAGC GCCTGTCCAG CTCCTTTCCC GGCAACCTGA TCAACGCGGT GAAGATGAAC ATGCCGGTGG GCTATCAGTC CGAGCTGATT TCCCATGAGG GCGCGGAGTT CTCCTACGTT CTTTCCGGAC AGATCGTCTA CACCATCGAA GGCCGCCAGT ATCCCCTCGG TGCCGGCGAC TCGGTGCATT TCGACGCCAC CAAGACCCAC TGCCTGGCCA ATGTCGGCAA CGACGTGGCG GAAGTCCTGA CCATCACCAC CATGGGCCTG TTCGACGACC ATCCAGCGCC CTGA
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Protein sequence | MTVDRIGERL RRYRRAAKKT LHQVASESGL TASFLSQAER NLTGVSISSL ANIAKSLNIP LNALFDQPAQ PQPDSHEGER VRYTIEGQPL AYERLSSSFP GNLINAVKMN MPVGYQSELI SHEGAEFSYV LSGQIVYTIE GRQYPLGAGD SVHFDATKTH CLANVGNDVA EVLTITTMGL FDDHPAP
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