| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5110 |
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| Symbol | |
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| ID | 5358315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5256175 |
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| End bp | 5257788 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640814156 |
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| Product | ABC transporter periplasmic binding protein |
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| Protein accession | YP_001350446 |
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| Protein GI | 152986767 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.321263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGAA ACGCCGTCAT CCGCTCCGCG ATCATGCCGT CCCTGCTCGG CGCCGCCCTG
ATCGCCAGTG TTCCCCAGGC CTTCGCCAGC AACCTGATCT TCTGCTCGGA AGGCAGCCCG
GCCGGCTTCG ATCCCGCCCA GTACACCACC GGTACCGATT TCGACGCCGC GGCGGAGACC
GTCTTCAACC GGCTGACCCA GTTCGAGCGC GGCGGCACCC GGGTGATCCC CGGCCTGGCG
GAGAGCTGGG AGGTCGGCGA CGACGGCAAG ACCTACACCT TCCACCTGCG CAAGGGCGTG
AAGTTCCACA GTACCGACTA CTTCAAGCCG ACCCGCGAAT TCAACGCCGA CGACGTGCTG
TTCACCTTCG AACGCATGCT CGACAAGAAC CATCCGTTCA GGAAGGCCTA CCCCACCGAG
TTCCCCTACT TCACCGACAT GGGCCTGGAC AAGAACATCG CCAGGGTCGA GAAGCTCGAC
GAGCACACGG TGAAGTTCAC CCTCAACGAG GTCGACGCCG CCTTCATCCA GAACCTGGCG
ATGCCCTTCC CGTCGATCCA GTCCGCCGAA TACGCCGCGC AACTGCTCAA GCAGGGCAAG
GCCAGCGACA TCAACCAGAA GCCGATCGGT ACCGGGCCCT TCGTGTTCAG CCGCTACCAG
AAAGATGCGC AGATCCGCTT CAAGGGCAAC AAGGACTATT GGAAGCCGGG CGAAGTGAAG
GTCGACAACC TGATCTTCGC CATCAACACC GACGCCTCGG TGCGCGCGCA GAAGCTCAAG
GCCGGCGAGT GCCAGATCAC CCTCAACCCG CGCCCCGCCG ATCTCGACGC ACTGAAGAAA
GACCCGAACC TGAACCTGCC GTCGCAGGCC GGCTTCAACC TCGGCTACAT CGCCTACAAC
GTCACCCACA AGCCGTTCGA CCAGTTGGAA GTACGCCAGG CGCTGGACAT GGCGGTGAAC
AAGAAAGCGA TCATCGATGC CGTCTACCAG GGCGCCGGCC AGTTGGCGAG CAACGGCATG
CCGCCGACCC AGTGGTCCTA CGACGAGACC ATCAAGGACG CGCCCTACGA TCCGGCCAAG
GCCAAGGAGC TGCTGAAGAA GGCCGGCGTC GCCGAGGGCA CGGAGATCAC CCTCTGGGCC
ATGCCGGTAC AGCGTCCCTA CAACCCCAAC GCCAAGCTGA TGGCGGAAAT GCTGCAGAAC
GACTGGGCGA AGATCGGCAT CAAGGCGAAG ATCGTCACCT ACGAATGGGG CGAATACATC
AAGCGCGCCA AGGGCGGCGA GCACGACGCC ATGCTGATCG GCTGGAGCGG CGACAACGGC
GACCCGGACA ACTGGCTCGG CACCCTCTAC GGCTGCGACG CGGTGGACGG CAACAACTTC
TCGAAATGGT GCGACGCCGG CTACGACAAG CTGGTCAAGG ACGCCAAGCG CACCACCGAC
CAGGGCAAGC GCACCGAGCT GTACAAGCAG GCCCAGCACA TCCTCAAGGA GCAGGTGCCG
ATCACCCCGA TCGCCCACTC CACCGTCTAC CAGCCGATGC GCAAGACGGT CCGGGACTTC
AAGATCAGCC CCTTCGGCCT GAACTCGTTC TACGAGGTCA GCGTCGGCAA GTAG
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| Protein sequence | MRRNAVIRSA IMPSLLGAAL IASVPQAFAS NLIFCSEGSP AGFDPAQYTT GTDFDAAAET
VFNRLTQFER GGTRVIPGLA ESWEVGDDGK TYTFHLRKGV KFHSTDYFKP TREFNADDVL
FTFERMLDKN HPFRKAYPTE FPYFTDMGLD KNIARVEKLD EHTVKFTLNE VDAAFIQNLA
MPFPSIQSAE YAAQLLKQGK ASDINQKPIG TGPFVFSRYQ KDAQIRFKGN KDYWKPGEVK
VDNLIFAINT DASVRAQKLK AGECQITLNP RPADLDALKK DPNLNLPSQA GFNLGYIAYN
VTHKPFDQLE VRQALDMAVN KKAIIDAVYQ GAGQLASNGM PPTQWSYDET IKDAPYDPAK
AKELLKKAGV AEGTEITLWA MPVQRPYNPN AKLMAEMLQN DWAKIGIKAK IVTYEWGEYI
KRAKGGEHDA MLIGWSGDNG DPDNWLGTLY GCDAVDGNNF SKWCDAGYDK LVKDAKRTTD
QGKRTELYKQ AQHILKEQVP ITPIAHSTVY QPMRKTVRDF KISPFGLNSF YEVSVGK
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