Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5110 |
Symbol | |
ID | 5358315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5256175 |
End bp | 5257788 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640814156 |
Product | ABC transporter periplasmic binding protein |
Protein accession | YP_001350446 |
Protein GI | 152986767 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.321263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAGAA ACGCCGTCAT CCGCTCCGCG ATCATGCCGT CCCTGCTCGG CGCCGCCCTG ATCGCCAGTG TTCCCCAGGC CTTCGCCAGC AACCTGATCT TCTGCTCGGA AGGCAGCCCG GCCGGCTTCG ATCCCGCCCA GTACACCACC GGTACCGATT TCGACGCCGC GGCGGAGACC GTCTTCAACC GGCTGACCCA GTTCGAGCGC GGCGGCACCC GGGTGATCCC CGGCCTGGCG GAGAGCTGGG AGGTCGGCGA CGACGGCAAG ACCTACACCT TCCACCTGCG CAAGGGCGTG AAGTTCCACA GTACCGACTA CTTCAAGCCG ACCCGCGAAT TCAACGCCGA CGACGTGCTG TTCACCTTCG AACGCATGCT CGACAAGAAC CATCCGTTCA GGAAGGCCTA CCCCACCGAG TTCCCCTACT TCACCGACAT GGGCCTGGAC AAGAACATCG CCAGGGTCGA GAAGCTCGAC GAGCACACGG TGAAGTTCAC CCTCAACGAG GTCGACGCCG CCTTCATCCA GAACCTGGCG ATGCCCTTCC CGTCGATCCA GTCCGCCGAA TACGCCGCGC AACTGCTCAA GCAGGGCAAG GCCAGCGACA TCAACCAGAA GCCGATCGGT ACCGGGCCCT TCGTGTTCAG CCGCTACCAG AAAGATGCGC AGATCCGCTT CAAGGGCAAC AAGGACTATT GGAAGCCGGG CGAAGTGAAG GTCGACAACC TGATCTTCGC CATCAACACC GACGCCTCGG TGCGCGCGCA GAAGCTCAAG GCCGGCGAGT GCCAGATCAC CCTCAACCCG CGCCCCGCCG ATCTCGACGC ACTGAAGAAA GACCCGAACC TGAACCTGCC GTCGCAGGCC GGCTTCAACC TCGGCTACAT CGCCTACAAC GTCACCCACA AGCCGTTCGA CCAGTTGGAA GTACGCCAGG CGCTGGACAT GGCGGTGAAC AAGAAAGCGA TCATCGATGC CGTCTACCAG GGCGCCGGCC AGTTGGCGAG CAACGGCATG CCGCCGACCC AGTGGTCCTA CGACGAGACC ATCAAGGACG CGCCCTACGA TCCGGCCAAG GCCAAGGAGC TGCTGAAGAA GGCCGGCGTC GCCGAGGGCA CGGAGATCAC CCTCTGGGCC ATGCCGGTAC AGCGTCCCTA CAACCCCAAC GCCAAGCTGA TGGCGGAAAT GCTGCAGAAC GACTGGGCGA AGATCGGCAT CAAGGCGAAG ATCGTCACCT ACGAATGGGG CGAATACATC AAGCGCGCCA AGGGCGGCGA GCACGACGCC ATGCTGATCG GCTGGAGCGG CGACAACGGC GACCCGGACA ACTGGCTCGG CACCCTCTAC GGCTGCGACG CGGTGGACGG CAACAACTTC TCGAAATGGT GCGACGCCGG CTACGACAAG CTGGTCAAGG ACGCCAAGCG CACCACCGAC CAGGGCAAGC GCACCGAGCT GTACAAGCAG GCCCAGCACA TCCTCAAGGA GCAGGTGCCG ATCACCCCGA TCGCCCACTC CACCGTCTAC CAGCCGATGC GCAAGACGGT CCGGGACTTC AAGATCAGCC CCTTCGGCCT GAACTCGTTC TACGAGGTCA GCGTCGGCAA GTAG
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Protein sequence | MRRNAVIRSA IMPSLLGAAL IASVPQAFAS NLIFCSEGSP AGFDPAQYTT GTDFDAAAET VFNRLTQFER GGTRVIPGLA ESWEVGDDGK TYTFHLRKGV KFHSTDYFKP TREFNADDVL FTFERMLDKN HPFRKAYPTE FPYFTDMGLD KNIARVEKLD EHTVKFTLNE VDAAFIQNLA MPFPSIQSAE YAAQLLKQGK ASDINQKPIG TGPFVFSRYQ KDAQIRFKGN KDYWKPGEVK VDNLIFAINT DASVRAQKLK AGECQITLNP RPADLDALKK DPNLNLPSQA GFNLGYIAYN VTHKPFDQLE VRQALDMAVN KKAIIDAVYQ GAGQLASNGM PPTQWSYDET IKDAPYDPAK AKELLKKAGV AEGTEITLWA MPVQRPYNPN AKLMAEMLQN DWAKIGIKAK IVTYEWGEYI KRAKGGEHDA MLIGWSGDNG DPDNWLGTLY GCDAVDGNNF SKWCDAGYDK LVKDAKRTTD QGKRTELYKQ AQHILKEQVP ITPIAHSTVY QPMRKTVRDF KISPFGLNSF YEVSVGK
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