| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5091 |
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| Symbol | cafA |
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| ID | 5356635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5233327 |
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| End bp | 5234784 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640814137 |
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| Product | cytoplasmic axial filament protein |
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| Protein accession | YP_001350427 |
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| Protein GI | 152988375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG AGATCCTGAT CAATATCACG CCGATGGAAT CGCGCGTGGC GGTGGTGGAG
AACGGCGTCC TGCAGGAAGT GCATGTCGAG CGCACCCAGC GTCGCGGCAT CGTCGGCAAT
ATCTACAAGG GGCGGGTGGT GCGGGTGCTG CCGGGGATGC AGGCGGCGTT CGTCGACATC
GGCCTGGAAC GGGCAGCGTT CATCCATGCC GCCGAGATCT CCACCCGCGA AGGCAGCGCG
GTGGAAAGCA TCAGCGCGCT GGTCCACGAA GGCCAGGCGC TGGTGGTGCA AGTGACCAAG
GACCCCATCG GCACCAAGGG CGCGCGCCTG ACCACCCACC TGTCGATTCC CTCGCGCTAC
CTGGTCTACA TGCCGCGCAC CAGCCATGTC GGGATTTCCC TGCGGATCGA GGACGAAGTC
GAACGCGAGC GGCTGAAGAA GGTGGTCGCC GACTGCGTCG CGGCGGAGGG GATCGAGGGG
CAGGGCGGCT TCATCCTGCG CACCGCCGCG GAAGGCGCGG GAGAGGACGA GATTCTCGCC
GACATCCGCT ACCTGCGCCG GCTATGGGAT CAGATCGCCG CGCAGATCCA GAGCATCGGC
GCACCTTCGG TGATCTACGA GGACCTGTCC CTGGCGATCC GTACCCTGCG CGACCTGGTC
AACCCGCGGA TCGAGAAGAT CCGCATCGAT TCCCGGGAGA ATTTCCAGAA GATCACTTCC
TTCGTCGAGG AACTGATGCC GGAGATTTCC GATCGGCTCG AGCACTATCC GGGCGAGCGG
CCGATCTTCG ACCTGTACGG CGTCGAGGAC GAGATCCAGA AGGCCCTGGA GCGCAAGGTG
CTGCTGAAGT CTGGCGGCTA CCTGATCGTC GATCCGACCG AGGCGATGAC CACCATCGAC
GTCAACACCG GCGCCTTCGT CGGCCATCGC AACCTCGAGG AAACCATCTT CAAGACCAAT
CTCGAGGCGG CCACCGCGAT CGCCCGCCAG TTGCGTCTGC GCAACCTGGG CGGGATCATC
ATCATCGACT TCATCGACAT GGAGGACGAG GAGCACCGCC GGCAGGTCCT GCGCACCCTG
GAGAAACAGC TGGAGCGCGA CCACGCCAAG ACCAACATCA TCGGCATCAC CGAACTCGGC
CTGGTGCAGA TGACCCGCAA GCGCACCCGC GAAAGCCTGG TGCAGATCCT CTGCGAGCCC
TGCCCCTGCT GCCAGGGACG CGGCATGCTG AAGACCGCGG AGACCACCTG CTACGAGATC
TTCCGCGAAA TCCTCCGCGA GGCGCGCGCC TACCAGGCCG ATTCCTACCT GGTGCTGGCC
AACCAGAAGG TGGTGGACCG GCTTCTCGAC GAGGAGTCGG GCAATGTCGC CGACCTCGAG
GCGTTCATCG GTCGCACCAT CAAGTTCCAG GTCGAGGCGA TGTACTCGCA GGAGCAATAT
GACGTGGTCC TGCTCTGA
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| Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGRVVRVL PGMQAAFVDI
GLERAAFIHA AEISTREGSA VESISALVHE GQALVVQVTK DPIGTKGARL TTHLSIPSRY
LVYMPRTSHV GISLRIEDEV ERERLKKVVA DCVAAEGIEG QGGFILRTAA EGAGEDEILA
DIRYLRRLWD QIAAQIQSIG APSVIYEDLS LAIRTLRDLV NPRIEKIRID SRENFQKITS
FVEELMPEIS DRLEHYPGER PIFDLYGVED EIQKALERKV LLKSGGYLIV DPTEAMTTID
VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNLGGII IIDFIDMEDE EHRRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLVQILCEP CPCCQGRGML KTAETTCYEI
FREILREARA YQADSYLVLA NQKVVDRLLD EESGNVADLE AFIGRTIKFQ VEAMYSQEQY
DVVLL
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