| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5084 |
|---|
| Symbol | fumC |
|---|
| ID | 5358185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5223224 |
|---|
| End bp | 5224600 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640814130 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001350420 |
|---|
| Protein GI | 152986164 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.209589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA CCTGCATCGA ACGCGACAGC ATGGGCGAAC TGGCGGTCCC GGCGACCGCC
CTCTATGGCG CCCAGACCCA GCGCGCGGTG AACAACTTCC CGGTCAGCGG CCAGCGCATG
CCGCAGGCCT TCGTCCGTGC CCTGCTGCTG GCCAAGGCCG CGGCGGCGCG GGCCAACGTC
TCCCTGCAGC AACTGGACGC ACCGATGGGC GAGGCGATCG CCGAGGCCTG CCTGCAATTG
CTCCAGGAAG ATTTCATGCA GCACTTCCCG GTGGACGTGT TCCAGACCGG CTCCGGTACC
AGTTCCAACA TGAATGCCAA CGAAGTGGTG GCGACCCTGG CCAGCCGGCG CCTGGGCGAC
AAGGTCGATC CGAACGACCA TGTGAATCGC GGGCAGAGCA GCAACGACAT CATCCCGTCG
ACCATCCACA TCAGCGCCGC CCTCGAGATC GGCGAACGCC TGCTGCCGGC GTTGCGCCAC
CTGGAGCAGA CCATCGAGCG CAAGGCCGGC GAAGTGCACG CCTACGTGAA AACCGGGCGC
ACCCACTTGA TGGACGCCAT GCCGGTGCGC ATGAGCCAGG TGCTCGGCGG CTGGGCGCAG
CAGGTCCGGC AGGCCGCCGG ACATATCGAG GGCGTGTTGC CGGCCTTGCA GCAACTGGCC
CAGGGCGGCA CCGCGGTGGG AACCGGGATC AACGCCCATC CGCAGTTCGC CGAGCGCTTC
AGCCAGGAGC TGAACGACCT GACCGGCCTG GCGTTCCGTC CCGGCGACGA CTTCTTCGCC
CTGATCGGTT CGCAGGACAC CGCGGTCGCC ACGTCCGGCC AACTGAAGAC CCTCGCCGTG
ACACTGATGA AGCTGGCCAA CGATCTGCGC TGGATGAACT CCGGCCCGCT CGCCGGGCTC
GGCGAGATCG AGCTGGAAGC GTTGCAGCCG GGTTCCTCGA TCATGCCCGG CAAGGTCAAC
CCGGTGATCC CCGAGGCCAC CGCCATGGTC GCCGCCCAGG TGATCGGCAA CGACGCCGCC
ATCGCCGTCG CCGGCCAGTC GGGCAACTTC GAACTGAACG TGATGCTGCC GCTGGTGGCC
GACAACCTGC TGCACAGCAT CCAGCTGCTG GCCAATGCCA GCCGCCTGCT GGCGGACAAG
GCCATCGCCA GCTTCAAGGT CAACCAGGCT AGGCTCGGCG AGGCGCTGGC GCGCAATCCG
ATCCTGGTCA CCGCGTTGAA TCCGATCATC GGTTACCAGA AGGCCGCGGA GATCGCCAAG
CAGGCCTATC GCGAAGCCCG GCCGATCATC GATGTGGCAC TGGAAAACAC CGACCTGGAC
CGCGCGCGCC TGGAGGCGCT GCTCGATCCG GAGAAACTCA CGGCCGGCGG CCTCTGA
|
|---|
| Protein sequence | MTDTCIERDS MGELAVPATA LYGAQTQRAV NNFPVSGQRM PQAFVRALLL AKAAAARANV
SLQQLDAPMG EAIAEACLQL LQEDFMQHFP VDVFQTGSGT SSNMNANEVV ATLASRRLGD
KVDPNDHVNR GQSSNDIIPS TIHISAALEI GERLLPALRH LEQTIERKAG EVHAYVKTGR
THLMDAMPVR MSQVLGGWAQ QVRQAAGHIE GVLPALQQLA QGGTAVGTGI NAHPQFAERF
SQELNDLTGL AFRPGDDFFA LIGSQDTAVA TSGQLKTLAV TLMKLANDLR WMNSGPLAGL
GEIELEALQP GSSIMPGKVN PVIPEATAMV AAQVIGNDAA IAVAGQSGNF ELNVMLPLVA
DNLLHSIQLL ANASRLLADK AIASFKVNQA RLGEALARNP ILVTALNPII GYQKAAEIAK
QAYREARPII DVALENTDLD RARLEALLDP EKLTAGGL
|
|---|
| |