Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5040 |
Symbol | |
ID | 5353690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5191294 |
End bp | 5192409 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640814086 |
Product | prophage CP-933T integrase |
Protein accession | YP_001350376 |
Protein GI | 152987232 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.530892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGATCA AGAAGCTGGA TAATGGGGAA TGGCTGGTGG ACTGCCGTCC GGATGGTCGT GACGGTCCAC GAATTCGTCG CAAGGTGAAG TCAAAGAACG AAGCCATGCA CCTGGAGCGT CGAATCATGG GCGACGGCTC CAAGGGCGAG TTTGAGAAGA AGCCGAAACG CGACGAACGC CGCCTGAGTG AACTGGTGGG GCTGTGGTTC ACCATGCACG GCAACACCTT AAAGCAAGGC GACAAGCGAC GCCGGGAAAT GCTGACCACT GTGGCGCGGA TCGGCGACCC CATGGTTTGC ACCTTCACCG CCGAGATGTT TGCCGACTAC CGTGCTGCCC GGATTGCAGG GAAGTGGGGG CGGCTCAAAA CTGGGTCAGG CAAGAAGAAA GGGCAGGCGG CCAAGCCTGT AGGTGCCAAG ACGTTGAACC ACGAACTGGT GCACCTGCGG GCCATGTTCA ATGAGCTGGA GCGTCTGGAG AAGTGGACAG GTGAGAACCC GTTGGCGAAG GTTCGAGCGC TCAAGCAGGA CGAGACGGAA ATGGGCTACC TGAGTCGGGA ACAGATCCCG CTTTTGCTGG CCAAGCTGGA TCAACACCCG TCCACGGTTG GCATGGTTGC CCGGGTCTGC TTAGCCACTG GTGCCAGGTG GTCCGAAGCA ATGAATCTGA CACCTCTGCA GGTGCGGGAT GGTCGAATCC ACTTCGTCCG CACGAAGTCG GCAAGAAACC GCGCAGTGCC GATTTCTGCC GAGCTGCAGA AGTCGCTTGA GGGGGCGCTC CCCTGGAGAT CGTCCTACTC GGCGACTTAC AAGGCGTTCG AGCTGGCGGT GGCCGAACTG GATCTGCAAC TGCCGAAAGG GCAACTGACC CATGTGCTGC GCCATACCTT CGCAAGTCAT TACATGATGA ACGGTGGTGA CATCCTGACC CTGCAGCGCG TGCTGGGCCA CGCGACTCTC CAGATGACGA TGCGCTATGC ACATTTCAGC CCCGGACACT TGGCCGAAGT CGTCAACCTG AACCCATTGG CTCAGGGGTG TGGACGTTTC GTGGACGCTG AAAAGGAATG CGAATCTGGT GTGGACGCAC AGGGTCAGGC TGTAGCCCAG GTGTGA
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Protein sequence | MSIKKLDNGE WLVDCRPDGR DGPRIRRKVK SKNEAMHLER RIMGDGSKGE FEKKPKRDER RLSELVGLWF TMHGNTLKQG DKRRREMLTT VARIGDPMVC TFTAEMFADY RAARIAGKWG RLKTGSGKKK GQAAKPVGAK TLNHELVHLR AMFNELERLE KWTGENPLAK VRALKQDETE MGYLSREQIP LLLAKLDQHP STVGMVARVC LATGARWSEA MNLTPLQVRD GRIHFVRTKS ARNRAVPISA ELQKSLEGAL PWRSSYSATY KAFELAVAEL DLQLPKGQLT HVLRHTFASH YMMNGGDILT LQRVLGHATL QMTMRYAHFS PGHLAEVVNL NPLAQGCGRF VDAEKECESG VDAQGQAVAQ V
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